Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2066845
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		1.000 0.949 3 2001 2019
dbSNP: rs2066844
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		1.000 0.940 2 2001 2018
dbSNP: rs2066842
rs2066842
NOD2
0.763 0.200 16 50710713 missense variant C/A;T snv 4.0E-06; 0.19
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.790 1.000 1 2002 2014
dbSNP: rs2066847
rs2066847
NOD2
0.716 0.400 16 50729868 frameshift variant C/-;CC delins 1.5E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.890 0.923 4 2005 2019
dbSNP: rs6478109
rs6478109
TNFSF15
0.752 0.320 9 114806486 upstream gene variant A/G snv 0.74
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 3 2005 2016
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.860 0.800 2 2005 2016
dbSNP: rs3810936
rs3810936
TNFSF15
0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 1.000 2 2005 2018
dbSNP: rs6478106
rs6478106 		0.925 0.080 9 114783386 downstream gene variant C/T snv 0.34
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2005 2019
dbSNP: rs6478108
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.760 1.000 2 2005 2018
dbSNP: rs10117785
rs10117785
TNFSF15
1.000 0.040 9 114789323 3 prime UTR variant T/A snv 0.34
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs1322054
rs1322054
TNFSF8 ; DELEC1
1.000 0.040 9 114907019 intron variant A/G snv 0.58
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs16931910
rs16931910
DELEC1
1.000 0.040 9 114856029 intron variant A/C snv 7.2E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs1885383
rs1885383
TNFSF8 ; DELEC1
1.000 0.040 9 114917522 intron variant G/A snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs2295800
rs2295800
TNFSF8 ; DELEC1
1.000 0.040 9 114901931 intron variant T/C snv 0.56
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs2974
rs2974
TNFSF8 ; DELEC1
1.000 0.040 9 114901892 intron variant T/C snv 0.56
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs3789879
rs3789879
TNFSF8 ; DELEC1
1.000 0.040 9 114915956 intron variant T/C snv 0.58
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs3789882
rs3789882
TNFSF8 ; DELEC1
1.000 0.040 9 114907419 intron variant A/T snv 0.22
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs4372078
rs4372078
TNFSF15
1.000 0.040 9 114801407 intron variant T/G snv 0.78
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs4574921
rs4574921 		0.882 0.160 9 114776054 upstream gene variant C/T snv 0.80
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 1 2005 2005
dbSNP: rs4979462
rs4979462
TNFSF15
0.790 0.240 9 114804733 intron variant C/T snv 0.13
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.720 1.000 1 2005 2016
dbSNP: rs7848647
rs7848647
TNFSF15
0.732 0.320 9 114806766 upstream gene variant T/C snv 0.74
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.840 1.000 1 2005 2018
dbSNP: rs7869487
rs7869487 		0.882 0.040 9 114818634 intergenic variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 1 2005 2015
dbSNP: rs11209026
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.900 0.944 8 2006 2020
dbSNP: rs11465804
rs11465804
IL23R
0.752 0.320 1 67236843 intron variant T/G snv 4.4E-02 5.4E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2006 2010
dbSNP: rs1343151
rs1343151
IL23R
0.752 0.400 1 67253446 intron variant G/A snv 0.41
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2006 2007