Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1800775
rs1800775
CETP
0.790 0.240 16 56961324 upstream gene variant C/A;G snv 0.51; 5.7E-06
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 8 2007 2019
dbSNP: rs3764261
rs3764261 		0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 19 2008 2019
dbSNP: rs9989419
rs9989419 		0.882 0.120 16 56951227 regulatory region variant A/G snv 0.55
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 9 2008 2019
dbSNP: rs4846914
rs4846914
GALNT2
0.925 0.080 1 230159944 intron variant G/A snv 0.45
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 8 2008 2019
dbSNP: rs2156552
rs2156552
LOC105372112
1.000 0.040 18 49655298 downstream gene variant A/G;T snv
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 6 2008 2019
dbSNP: rs10503669
rs10503669 		0.925 0.080 8 19990179 intergenic variant C/A snv 8.4E-02
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2019
dbSNP: rs17482753
rs17482753 		1.000 0.080 8 19975135 regulatory region variant G/T snv 8.8E-02
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2019
dbSNP: rs1800588
rs1800588
LIPC ; ALDH1A2
0.790 0.200 15 58431476 intron variant C/G;T snv 0.30
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2019
dbSNP: rs2144300
rs2144300
GALNT2
0.882 0.040 1 230159169 intron variant C/T snv 0.44
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2018
dbSNP: rs328
rs328
LPL
0.732 0.440 8 19962213 stop gained C/G snv 9.2E-02 9.0E-02
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2019
dbSNP: rs5880
rs5880
CETP
0.827 0.040 16 56981179 missense variant G/C snv 5.2E-02 3.7E-02
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 4 2008 2019
dbSNP: rs1864163
rs1864163
CETP
0.882 0.120 16 56963321 intron variant G/A snv 0.26
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 3 2008 2019
dbSNP: rs2338104
rs2338104
KCTD10
1.000 0.040 12 109457363 non coding transcript exon variant C/G snv 0.58
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 3 2008 2019
dbSNP: rs3890182
rs3890182
ABCA1
0.925 0.120 9 104885374 intron variant G/A;T snv
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 3 2008 2019
dbSNP: rs4775041
rs4775041
ALDH1A2
1.000 0.040 15 58382496 intron variant G/C snv 0.24
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 3 2008 2019
dbSNP: rs9282541
rs9282541
ABCA1
0.790 0.160 9 104858554 missense variant G/A snv 1.3E-02 4.4E-03
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 3 2008 2019
dbSNP: rs255052
rs255052
DUS2 ; DPEP2
0.925 0.040 16 67991092 intron variant G/A snv 0.17 0.17
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 2 2008 2019
dbSNP: rs711752
rs711752
CETP
1.000 0.040 16 56962299 splice region variant G/A;C snv
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 2 2008 2016
dbSNP: rs7205804
rs7205804
CETP
16 56970977 intron variant G/A snv 0.34
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 2 2008 2019
dbSNP: rs4149268
rs4149268
ABCA1
1.000 0.040 9 104884939 intron variant C/T snv 0.46
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 1 2008 2008
dbSNP: rs7240405
rs7240405
LOC105372112
18 49632720 intergenic variant A/G snv 0.86
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 1 2008 2008
dbSNP: rs964184
rs964184
ZPR1
0.716 0.440 11 116778201 3 prime UTR variant G/C snv 0.82
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 11 2009 2019
dbSNP: rs12678919
rs12678919 		0.882 0.080 8 19986711 intergenic variant A/G snv 1.0E-01
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 10 2009 2019
dbSNP: rs1800961
rs1800961
HNF4A
0.851 0.160 20 44413724 missense variant C/T snv 3.1E-02 2.5E-02
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 10 2009 2019
dbSNP: rs1883025
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28
CUI: C0392885
Disease: High density lipoprotein measurement
High density lipoprotein measurement 		0.800 1.000 10 2009 2019