Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs4263839
rs4263839
TNFSF15
0.807 0.160 9 114804160 intron variant A/G snv 0.75
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 0.750 1 2008 2014
dbSNP: rs7869487
rs7869487 		0.882 0.040 9 114818634 intergenic variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 1 2005 2015
dbSNP: rs2872507
rs2872507 		0.752 0.360 17 39884510 intergenic variant G/A;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2008 2016
dbSNP: rs6478106
rs6478106 		0.925 0.080 9 114783386 downstream gene variant C/T snv 0.34
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2005 2019
dbSNP: rs9271366
rs9271366 		0.807 0.240 6 32619077 intergenic variant G/A snv 0.86
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 2 2011 2015
dbSNP: rs11175593
rs11175593
LRRK2 ; LINC02471 ; LOC105369735 ; LRRK2-DT
0.882 0.160 12 40208138 non coding transcript exon variant C/T snv 2.8E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 1 2008 2013
dbSNP: rs11747270
rs11747270
IRGM
0.790 0.240 5 150879305 intron variant A/G snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 0.667 1 2008 2020
dbSNP: rs1250550
rs1250550
ZMIZ1
0.851 0.240 10 79300560 intron variant C/A snv 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 1 2010 2017
dbSNP: rs4409764
rs4409764 		0.925 0.040 10 99524480 upstream gene variant T/A;G snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 1 2010 2019
dbSNP: rs212388
rs212388
LOC105378083 ; LOC112267968
0.827 0.240 6 159069404 intron variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 3 2010 2017
dbSNP: rs3764147
rs3764147
LACC1
0.807 0.280 13 43883789 missense variant A/G snv 0.28 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 3 2008 2017
dbSNP: rs9858542
rs9858542
BSN
0.925 0.040 3 49664550 synonymous variant G/A snv 0.26 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 3 2007 2010
dbSNP: rs10045431
rs10045431 		0.851 0.240 5 159387525 intron variant A/C snv 0.78
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2008 2014
dbSNP: rs11805303
rs11805303
IL23R ; C1orf141
0.827 0.240 1 67209833 intron variant C/T snv 0.30
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2012
dbSNP: rs17221417
rs17221417
NOD2
0.925 0.040 16 50705671 intron variant C/G snv 0.20
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2017
dbSNP: rs17234657
rs17234657 		0.882 0.120 5 40401407 intergenic variant T/G snv 0.14
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2010
dbSNP: rs2188962
rs2188962
IRF1-AS1
0.882 0.160 5 132435113 intron variant C/T snv 0.29
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2008 2017
dbSNP: rs2301436
rs2301436
FGFR1OP
0.752 0.320 6 167024500 intron variant C/T snv 0.42
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2008 2016
dbSNP: rs5743289
rs5743289
NOD2
1.000 0.040 16 50722863 intron variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2007 2014
dbSNP: rs6651252
rs6651252
LINC00824
0.790 0.200 8 128554935 intron variant T/C snv 0.19
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 2 2010 2019
dbSNP: rs10210302
rs10210302
ATG16L1
1.000 0.040 2 233250193 intron variant C/A;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2007 2010
dbSNP: rs102275
rs102275
TMEM258
0.827 0.320 11 61790331 non coding transcript exon variant T/C snv 0.47
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2010 2018
dbSNP: rs10761659
rs10761659 		0.925 0.040 10 62685804 intron variant A/G snv 0.43
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2010 2017
dbSNP: rs11190140
rs11190140
NKX2-3 ; LINC01475
0.827 0.160 10 99531836 upstream gene variant T/C snv 0.55
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2008 2014
dbSNP: rs11195128
rs11195128 		1.000 0.040 10 110426390 downstream gene variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 1 2014 2017