Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 15
rs2227564
PLAU ; C10orf55
0.763 0.320 10 73913343 missense variant T/C snv 0.75 0.81 3
rs3810936
TNFSF15
0.742 0.320 9 114790605 synonymous variant T/C snv 0.71 0.75 1
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 61
rs6795970
SCN10A
0.807 0.200 3 38725184 missense variant A/G snv 0.65 0.70 3
rs2274910
ITLN1
0.827 0.200 1 160882256 non coding transcript exon variant T/C snv 0.65 0.58 1
rs449454
NDFIP1
0.925 0.080 5 142153497 3 prime UTR variant A/G snv 0.65 0.68 3
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 55
rs12103
INTS11 ; PUSL1 ; MIR6727
0.925 0.040 1 1312114 synonymous variant T/A;C;G snv 0.56 3
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 1
rs1042058
MAP3K8
1.000 0.040 10 30439172 synonymous variant T/C snv 0.51 0.45 2
rs1990760
IFIH1
0.672 0.480 2 162267541 missense variant C/T snv 0.50 0.45 7
rs352140
TLR9
0.630 0.680 3 52222681 synonymous variant C/A;G;T snv 2.0E-05; 0.49 1
rs2274351
SUFU ; ACTR1A
10 102504350 intron variant C/G;T snv 0.48 1
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48 7
rs721917
SFTPD
0.752 0.360 10 79946568 missense variant A/G snv 0.47 0.42 1
rs2241880
SCARNA5 ; ATG16L1
0.627 0.600 2 233274722 missense variant A/G snv 0.45 0.44 1
rs12994997
ATG16L1
1.000 0.040 2 233264857 intron variant G/A;C snv 0.45; 4.0E-06 2
rs1292053
TUBD1
1.000 0.040 17 59886176 missense variant A/G snv 0.45 0.46 2
rs1250569
ZMIZ1
0.925 0.040 10 79285450 intron variant T/C snv 0.44 0.51 1
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 2
rs10781499
CARD9
0.925 0.040 9 136371953 synonymous variant G/A snv 0.41 0.38 3
rs4077515
CARD9
0.763 0.360 9 136372044 missense variant C/A;T snv 4.0E-06; 0.41 4
rs501916
SEMA6D
1.000 0.040 15 47761032 synonymous variant C/A snv 0.40 0.41 2