Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1046175
PAOX
0.851 0.080 10 133391446 stop gained C/A;G;T snv 1.2E-05; 0.88 4
rs1650697
MSH3 ; DHFR
0.925 0.120 5 80654962 missense variant A/G;T snv 0.86 3
rs1950902
MTHFD1
0.776 0.240 14 64415662 missense variant A/G snv 0.83 0.83 10
rs2966952
FASTKD3 ; MTRR
1.000 0.080 5 7867917 missense variant T/C;G snv 0.82; 4.0E-06 0.85 1
rs471692
TOP2A
0.925 0.080 17 40400518 intron variant T/A;C snv 0.79 3
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1340420
TNKS2
0.925 0.080 10 91857549 intron variant A/G snv 0.71 0.70 3
rs586339
KDM4A
1.000 0.080 1 43671586 missense variant C/A;G;T snv 0.70 0.78 2
rs1948
CHRNB4
0.827 0.160 15 78625057 synonymous variant A/G;T snv 0.69 5
rs228729
PER3
0.827 0.120 1 7785635 intron variant T/C snv 0.69 0.69 5
rs373572
RAD18
0.882 0.120 3 8913705 missense variant C/T snv 0.68 0.70 6
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs4636297
EGFL7 ; MIR126
0.724 0.360 9 136670698 intron variant A/G snv 0.67 0.65 14
rs2228001
XPC
0.570 0.480 3 14145949 missense variant G/T snv 0.63 0.65 60
rs1800975
XPA
0.701 0.360 9 97697296 5 prime UTR variant T/C;G snv 0.63; 4.5E-06; 4.5E-06 19
rs861537
XRCC3 ; KLC1 ; LOC112268131
1.000 0.080 14 103700738 intron variant C/T snv 0.61 0.61 1
rs1049434
SLC16A1
0.925 0.120 1 112913924 missense variant A/T snv 0.59 0.66 2
rs2292832
MIR149 ; GPC1 ; LOC100130449
0.605 0.640 2 240456086 non coding transcript exon variant T/A;C snv 0.59 46
rs6062251
MIR133A2 ; MIR1-1HG
1.000 0.080 20 62565060 non coding transcript exon variant T/C snv 0.58 0.62 1
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 106
rs1051266
SLC19A1
0.627 0.640 21 45537880 missense variant T/C;G snv 0.55; 4.4E-06 41
rs2227928
ATR
0.851 0.200 3 142562770 missense variant A/G snv 0.55 0.63 5
rs2032582
ABCB1
0.538 0.800 7 87531302 missense variant A/C;T snv 0.54; 3.8E-02 97
rs1050171
EGFR ; EGFR-AS1
0.851 0.120 7 55181370 missense variant G/A;C snv 0.52; 4.0E-06 6