Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs20541
IL13 ; TH2LCRR
0.585 0.720 5 132660272 missense variant A/G snv 0.72 0.77 4
rs27044
ERAP1 ; LOC102724748
0.827 0.240 5 96783148 missense variant G/C snv 0.69 0.71 1
rs30187
ERAP1
0.732 0.360 5 96788627 missense variant T/A;C snv 0.62 1
rs763361
CD226
0.689 0.520 18 69864406 missense variant T/A;C snv 4.0E-06; 0.52 1
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 5
rs33980500
TRAF3IP2-AS1 ; TRAF3IP2
0.742 0.200 6 111592059 missense variant C/T snv 8.6E-02 9.7E-02 3
rs763780
IL17F
0.531 0.720 6 52236941 missense variant T/C snv 6.7E-02 6.6E-02 1
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 6
rs458017
MFSD4B ; REV3L
0.925 0.080 6 111374888 missense variant T/C snv 5.9E-02 5.6E-02 2
rs13190932
TRAF3IP2 ; TRAF3IP2-AS1
1.000 0.080 6 111591867 missense variant G/A snv 5.3E-02 5.0E-02 1
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 5
rs34536443
TYK2
0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 20
rs2066844
NOD2
0.587 0.520 16 50712015 missense variant C/T snv 2.6E-02 2.9E-02 5
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 5
rs12188300 0.807 0.120 5 159402519 intron variant A/G;T snv 6
rs4921482
LOC285626
0.807 0.120 5 159337470 intron variant T/C;G snv 6
rs74817271
TNIP1
0.807 0.120 5 151090412 intron variant G/A snv 5.0E-02 6
rs10865331 0.827 0.120 2 62324337 intergenic variant A/G snv 0.57 5
rs2201841
C1orf141 ; IL23R
0.716 0.440 1 67228519 intron variant A/G;T snv 3
rs744166
STAT3
0.689 0.560 17 42362183 intron variant A/G snv 0.48 3
rs12191877
HLA-B
0.851 0.120 6 31285148 intron variant C/T snv 0.12 2
rs13017599
NONOP2
0.882 0.160 2 60937196 non coding transcript exon variant G/A snv 0.25 2
rs2066808
STAT2
0.807 0.280 12 56344189 intron variant A/G snv 0.21 2
rs4683946 0.925 0.080 3 101896982 intron variant G/T snv 0.19 2