Source: CLINGEN

Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5077
Gene Symbol: PAX3
PAX3
CUI: C1847800
Disease: Waardenburg Syndrome Type 1
Waardenburg Syndrome Type 1
1.000 Biomarker CLINGEN A novel PAX3 mutation in a Korean patient with Waardenburg syndrome type 1 and unilateral branch retinal vein and artery occlusion: a case report. 30314436

2018

Entrez Id: 1910
Gene Symbol: EDNRB
EDNRB
CUI: C1848519
Disease: WAARDENBURG SYNDROME, TYPE 4A
WAARDENBURG SYNDROME, TYPE 4A
1.000 Biomarker CLINGEN Homozygous EDNRB mutation in a patient with Waardenburg syndrome type 1. 28502583

2018

Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
CUI: C1853490
Disease: 22q13.3 Deletion Syndrome
22q13.3 Deletion Syndrome
1.000 Biomarker CLINGEN Delineation of the genetic and clinical spectrum of Phelan-McDermid syndrome caused by SHANK3 point mutations. 29719671

2018

Entrez Id: 6925
Gene Symbol: TCF4
TCF4
CUI: C1970431
Disease: PITT-HOPKINS SYNDROME
PITT-HOPKINS SYNDROME
1.000 Biomarker CLINGEN Common Pathophysiology in Multiple Mouse Models of Pitt-Hopkins Syndrome. 29222403

2018

Entrez Id: 2175
Gene Symbol: FANCA
FANCA
FANCONI ANEMIA, COMPLEMENTATION GROUP A (disorder)
1.000 Biomarker CLINGEN Fanconi anaemia and cancer: an intricate relationship. 29376519

2018

Entrez Id: 6519
Gene Symbol: SLC3A1
SLC3A1
CUI: C0010691
Disease: Cystinuria
Cystinuria
1.000 Biomarker CLINGEN Genotype and Phenotype Analysis in Pediatric Patients with Cystinuria. 28049243

2017

Entrez Id: 132884
Gene Symbol: EVC2
EVC2
CUI: C0013903
Disease: Ellis-Van Creveld Syndrome
Ellis-Van Creveld Syndrome
1.000 Biomarker CLINGEN Loss of Function of Evc2 in Dental Mesenchyme Leads to Hypomorphic Enamel. 28081373

2017

Entrez Id: 2131
Gene Symbol: EXT1
EXT1
CUI: C0015306
Disease: Hereditary Multiple Exostoses
Hereditary Multiple Exostoses
1.000 Biomarker CLINGEN Hereditary Multiple Exostoses (HME) is a rare pediatric disorder caused by loss-of-function mutations in the genes encoding the heparan sulfate (HS)-synthesizing enzymes EXT1 or EXT2. 28445472

2017

Entrez Id: 2332
Gene Symbol: FMR1
FMR1
CUI: C0016667
Disease: Fragile X Syndrome
Fragile X Syndrome
1.000 Biomarker CLINGEN This study suggests that intragenic FMR1 variants, although much less frequent than CGG expansions, are a significant mutational mechanism leading to FXS and demonstrates the interest of HTS approaches to detect them in ID patients with a negative standard work-up. 28176767

2017

Entrez Id: 2157
Gene Symbol: F8
F8
CUI: C0019069
Disease: Hemophilia A
Hemophilia A
1.000 Biomarker CLINGEN : Defects in the coagulation factor VIII gene cause haemophilia A, which is the most common X-linked recessive bleeding disorder. 28252515

2017

Entrez Id: 3784
Gene Symbol: KCNQ1
KCNQ1
CUI: C0022387
Disease: Jervell-Lange Nielsen Syndrome
Jervell-Lange Nielsen Syndrome
1.000 Biomarker CLINGEN Sequencing of the KCNQ1 gene identified two novel KCNQ1 variants interpreted to be pathogenic, and the patient was finally diagnosed with Jervell and Lange-Nielsen syndrome.© 2016 Wiley Periodicals, Inc. 27868350

2017

Entrez Id: 3784
Gene Symbol: KCNQ1
KCNQ1
CUI: C0022387
Disease: Jervell-Lange Nielsen Syndrome
Jervell-Lange Nielsen Syndrome
1.000 Biomarker CLINGEN Three families of JLNS who presented with long QT and deafness and who carry homozygous, or compound heterozygous mutation in KCNQ1 gene were presented in this report. 29037160

2017

Entrez Id: 538
Gene Symbol: ATP7A
ATP7A
CUI: C0022716
Disease: Menkes Kinky Hair Syndrome
Menkes Kinky Hair Syndrome
1.000 Biomarker CLINGEN Menkes disease is a rare neurodegenerative disorder caused by mutations in ATP7A gene. 25771438

2017

Entrez Id: 4724
Gene Symbol: NDUFS4
NDUFS4
CUI: C0023264
Disease: Leigh Disease
Leigh Disease
1.000 Biomarker CLINGEN A novel NDUFS4 frameshift mutation causes Leigh disease in the Hutterite population. 27671926

2017

Entrez Id: 3251
Gene Symbol: HPRT1
HPRT1
CUI: C0023374
Disease: Lesch-Nyhan Syndrome
Lesch-Nyhan Syndrome
1.000 Biomarker CLINGEN A subcellular map of the human proteome. 28495876

2017

Entrez Id: 1629
Gene Symbol: DBT
DBT
CUI: C0024776
Disease: Maple Syrup Urine Disease
Maple Syrup Urine Disease
1.000 Biomarker CLINGEN Twenty novel mutations in BCKDHA, BCKDHB and DBT genes in a cohort of 52 Saudi Arabian patients with maple syrup urine disease. 28417071

2017

Entrez Id: 1629
Gene Symbol: DBT
DBT
CUI: C0024776
Disease: Maple Syrup Urine Disease
Maple Syrup Urine Disease
1.000 Biomarker CLINGEN Maple syrup urine disease: mechanisms and management. 28919799

2017

Entrez Id: 2200
Gene Symbol: FBN1
FBN1
CUI: C0024796
Disease: Marfan Syndrome
Marfan Syndrome
1.000 Biomarker CLINGEN Our MFS-hiPSC-derived smooth muscle cells (SMCs) recapitulated the pathology seen in Marfan aortas, including defects in fibrillin-1 accumulation, extracellular matrix degradation, transforming growth factor-β (TGF-β) signaling, contraction and apoptosis; abnormalities were corrected by CRISPR-based editing of the FBN1 mutation. 27893734

2017

Entrez Id: 3423
Gene Symbol: IDS
IDS
CUI: C0026705
Disease: Mucopolysaccharidosis II
Mucopolysaccharidosis II
1.000 Biomarker CLINGEN Severe mucopolysaccharidosis type II (MPS II) is a progressive lysosomal storage disease caused by mutations in the IDS gene, leading to a deficiency in the iduronate-2-sulfatase enzyme that is involved in heparan sulphate and dermatan sulphate catabolism. 28207863

2017

Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
CUI: C0028326
Disease: Noonan Syndrome
Noonan Syndrome
1.000 Biomarker CLINGEN Here, we report on the identification of five different PTPN11 missense changes affecting residues Leu<sup>261</sup> , Leu<sup>262</sup> , and Arg<sup>265</sup> in 16 unrelated individuals with clinical diagnosis of NS or with features suggestive for this disorder, specifying a novel disease-causing mutation cluster. 28074573

2017

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0085390
Disease: Li-Fraumeni Syndrome
Li-Fraumeni Syndrome
1.000 Biomarker CLINGEN Associations Between Cancer Predisposition Testing Panel Genes and Breast Cancer. 28418444

2017

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C0085390
Disease: Li-Fraumeni Syndrome
Li-Fraumeni Syndrome
1.000 Biomarker CLINGEN The contribution of pathogenic variants in breast cancer susceptibility genes to familial breast cancer risk. 28649662

2017

Entrez Id: 5354
Gene Symbol: PLP1
PLP1
CUI: C0205711
Disease: Pelizaeus-Merzbacher Disease
Pelizaeus-Merzbacher Disease
1.000 Biomarker CLINGEN Pelizaeus-Merzbacher disease (PMD) is an X-linked recessive hypomyelination disorder caused by mutations in the proteolipid protein 1 gene (<i>PLP1</i>) located on chromosome Xq22. 28101371

2017

Entrez Id: 57492
Gene Symbol: ARID1B
ARID1B
CUI: C0265338
Disease: Coffin-Siris syndrome
Coffin-Siris syndrome
1.000 Biomarker CLINGEN Arid1b haploinsufficiency disrupts cortical interneuron development and mouse behavior. 29184203

2017

Entrez Id: 1281
Gene Symbol: COL3A1
COL3A1
CUI: C0268338
Disease: Ehlers-Danlos Syndrome, Type IV
Ehlers-Danlos Syndrome, Type IV
1.000 Biomarker CLINGEN Six uneventful pregnancy outcomes in an extended vascular Ehlers-Danlos syndrome family. 28102592

2017