Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Genetic variants in 3'-UTRs of methylenetetrahydrofolate reductase (MTHFR) predict colorectal cancer susceptibility in Koreans. 26046315

2015

Entrez Id: 1544
Gene Symbol: CYP1A2
CYP1A2
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE These results also indicate that the NAT2 in combination with CYP1A1*2C, CYP1A2*1C, or GSTM1 genotypes may strongly confer susceptibility to colorectal cancer. 18159984

2008

Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The joint effect of tobacco exposure and the MUTYH Gln324His showed a significant association with colorectal cancer risk in non-smokers (adjusted OR 4.08, 95%CI 1.22-13.58, p = 0.022) and the APEX1 Asp148Glu was significantly increased in smokers (adjusted OR 5.02, 95%CI 1.80-13.99, p = 0.002). 18823566

2008

Entrez Id: 7298
Gene Symbol: TYMS
TYMS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The TS genotype of 68 patients with colorectal cancer was determined by polymerase chain reaction (PCR) and restriction fragment length polymorphism analysis in peripheral blood mononuclear cells and tumour tissue. 20515563

2010

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE This study was undertaken to identify BRAF and PIK3CA mutations in patients with colorectal cancer by high-resolution melting (HRM) analysis. 22579930

2012

Entrez Id: 4513
Gene Symbol: COX2
COX2
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Effect of COX2 -765G>C and c.3618A>G polymorphisms on the risk and survival of sporadic colorectal cancer. 19468846

2009

Entrez Id: 4312
Gene Symbol: MMP1
MMP1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The collagenase-1 (MMP-1) gene promoter polymorphism - 1607/2G is associated with favourable prognosis in patients with colorectal cancer. 17311017

2007

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Mutations in the K-ras gene detected in the plasma of 64 (28%) of 232 patients were statistically significantly associated with colorectal cancer risk factors (P =.0002). 10841827

2000

Entrez Id: 673
Gene Symbol: BRAF
BRAF
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE BRAF mutation is associated with the CpG island methylator phenotype in colorectal cancer from young patients. 18778891

2009

Entrez Id: 7099
Gene Symbol: TLR4
TLR4
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE TLR2+597CC homozygous had 5-fold decreased risk (odds ratio (OR)=0.21, 95% CI: 0.09-0.50, p<0.001) and TLR4 299Gly homozygous 3-fold increased risk of colorectal cancer (OR=3.30, 95% CI: 1.18-9.28, p=0.015). 22999059

2013

Entrez Id: 4436
Gene Symbol: MSH2
MSH2
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE A meta-analysis of the prevalence of somatic mutations in the hMLH1 and hMSH2 genes in colorectal cancer. 21988782

2012

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE As a result, a classification model built with methylation of SDC2 and SFRP2, KRAS mutations and hemoglobin showed a sensitivity of 91.4% for colorectal cancer and 60% for adenoma with the specificity of 86.1%. 31456088

2019

Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The role of MYH gene in genetic predisposition to colorectal cancer: another piece of the puzzle. 18495334

2008

Entrez Id: 324
Gene Symbol: APC
APC
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Familial adenomatous polyposis (FAP) is an autosomal dominantly inherited predisposition to colorectal cancer, which is caused by germline mutations in the adenomatous polyposis coli (APC) gene. 11933206

2002

Entrez Id: 1045
Gene Symbol: CDX2
CDX2
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE By analogy with SMAD4, CDX2 is also a candidate for somatic mutation in sporadic colorectal cancer. 11355940

2001

Entrez Id: 56994
Gene Symbol: CHPT1
CHPT1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Seventy-five patients with advanced colorectal cancer and treated with CPT-11 and 5-fluorouracil, entered the study. 15297419

2004

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Value of mismatch repair, KRAS, and BRAF mutations in predicting recurrence and benefits from chemotherapy in colorectal cancer. 21383284

2011

Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Collectively, the results of the present study suggest that there were no significant associations of ABCB1/MDR1 C3435T polymorphism with colorectal cancer observed for all comparison models. 23504525

2013

Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The CYP 2E1 c2 allele proved to be in significant association with colorectal cancer (OR: 1.91, 95% CI: 1.05-3.52), the CYP 1A1 Val allele was also overrepresented among colon cancer patients (OR: 1.57, 95% CI: 0.90-2.74), and the frequency of GSTM1 homozygous 0 genotype showed only minor difference (OR: 1.19, 95% CI: 0.75-1.35). 10769717

2000

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE A comparison of three methods for detecting KRAS mutations in formalin-fixed colorectal cancer specimens. 22713664

2012

Entrez Id: 4292
Gene Symbol: MLH1
MLH1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Risk Factors Associated with Colorectal Cancer in a Subset of Patients with Mutations in MLH1 and MSH2 in Taiwan Fulfilling the Amsterdam II Criteria for Lynch Syndrome. 26053027

2015

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE In overall, besides implicating ERBB2 as an important therapeutic target under neo-adjuvant or adjuvant settings, we present the first evidence that the presence of KRAS mutations may preclude gallbladder cancer patients to respond to anti-EGFR treatment, similar to a clinical algorithm commonly practiced to opt for anti-EGFR treatment in colorectal cancer. 30304546

2019

Entrez Id: 4292
Gene Symbol: MLH1
MLH1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE Lynch syndrome (hereditary non-polyposis colorectal cancer) is an inherited disease caused by germ-line mutation in mismatch repair genes such as MLH1, MSH2, and MSH6. 19685281

2009

Entrez Id: 7421
Gene Symbol: VDR
VDR
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE The -4817 G>A (rs2238136) variant of the vitamin D receptor gene: a probable risk factor for colorectal cancer. 22167329

2012

Entrez Id: 7040
Gene Symbol: TGFB1
TGFB1
Malignant neoplasm of colon and/or rectum
0.100 GeneticVariation BEFREE In this study, the association between -800 G/A and -509 C/T polymorphisms of the transforming growth factor beta1 gene, TGFB1, and susceptibility to colorectal cancer in Iranian patients was investigated. 19264229

2009