Source: BEFREE

Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE The p53 mutation probably played a role in the development of the lymphoma rather than morphologic transformation of the CLL/SLL in this case. 8118038

1994

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE A case of lymphoblastoid natural killer (NK)-cell lymphoma: association with the NK-cell receptor complex CD94/NKG2 and TP53 intragenic deletion. 11841384

2002

Entrez Id: 653108
Gene Symbol: CXADRP1
CXADRP1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE Chimeric antigen receptor T (CAR-T) cells are a promising new treatment for patients with relapsed or refractory hematologic malignancies, including lymphoma. 30841880

2019

Entrez Id: 238
Gene Symbol: ALK
ALK
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE This report describes a primary gastric ALK-positive B-lineage lymphoma in which a clathrin (CLTC)-ALK fusion was identified by RT-PCR and direct sequencing of the breakpoint. 15492998

2004

Entrez Id: 604
Gene Symbol: BCL6
BCL6
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 AlteredExpression BEFREE Previous studies have suggested that NF-kappaB activity is suppressed in germinal center and lymphoma B cells that express high levels of BCL-6, and yet the reason for this is unknown. 15611242

2005

Entrez Id: 5594
Gene Symbol: MAPK1
MAPK1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 AlteredExpression BEFREE Our method can quantify amounts of MYC oncoprotein and B cell lymphoma protein-2 (BCL2) in Burkitt's and follicular lymphoma; identify changes in activation of extracellular signal-related kinases-1 (ERK1) and ERK2, mitogen-activated kinase-1 (MEK), signal transducer and activator of transcription protein-3 (STAT3) and STAT5, c-Jun N-terminal kinase (JNK) and caspase-3 in imatinib-treated chronic myelogeneous leukemia (CML) cells; measure an unanticipated change in the phosphorylation of an ERK2 isomer in individuals with CML who responded to imatinib; and detect a decrease in STAT3 and STAT5 phosphorylation in individuals with lymphoma who were treated with atorvastatin. 19363496

2009

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE TRRAP silencing attenuated p53 accumulation in lymphoma and colon cancer models, whereas TRRAP overexpression increased mutp53 levels, suggesting a role for TRRAP across cancer entities and p53 mutations. 29653964

2018

Entrez Id: 4615
Gene Symbol: MYD88
MYD88
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE Mutation of the MYD88 gene has recently been identified in activated B-cell-like diffuse cell lymphoma and enhanced Janus kinase/signal transducer and activator of transcription (JAK-STAT) and nuclear factor κB (NF-κB) signaling pathways. 23532735

2013

Entrez Id: 23158
Gene Symbol: TBC1D9
TBC1D9
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE Neither codeinone nor morphine inhibited P-glycoprotein-mediated rhodamine-123 efflux in multidrug resistant mouse T lymphoma L5178 transfected with human MDR 1 gene. 12017290

2002

Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE CD43 antigen was positive, and rearrangement of TCR-beta gene was observed.The lymphoma was the T-cell type. 8127156

1994

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE Poor prognosis in non-villous splenic marginal zone cell lymphoma is associated with p53 mutations. 9375758

1997

Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE A pilot trial of rituximab and LAK cells in patients with rituximab-refractory CD20+ lymphoma was conducted to evaluate this approach. 17438098

2007

Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE However, the lineage assignment of sinonasal lymphoma with a monoclonal TCR-gamma rearrangement is unclear because of its mixed NK/T phenotype. 12533686

2003

Entrez Id: 54474
Gene Symbol: KRT20
KRT20
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE MHC class I-negative lymphoma cells (Daudi) were labelled with a biotinylated mAb specific for a cell surface protein (anti-CD20) then linked to soluble biotinylated HLA-A2/gag complexes using an avidin bridge. 10737389

2000

Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE Fourteen hydantoin derivatives were synthesized and studied for their capacity to increase accumulation of ethidium bromide (EB) by mouse lymphoma cancer cells that were transfected with the human ABCB1 gene and overexpress the human ABCB1 pump. 22351672

2012

Entrez Id: 596
Gene Symbol: BCL2
BCL2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE Interestingly, the histiocytic tumor component has been shown to harbor BCL2 gene translocations that are identical to those found in the lymphoma. 27134111

2016

Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE Sixty cases with a confirmed histological diagnosis of a T-cell lymphoproliferative disorder and TCR gamma GR were identified in our lymphoma registry from 1995 to 2001. 12707372

2003

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 GeneticVariation BEFREE To explore the efficacy of p53 reactivation in this scenario, we used a reversibly switchable p53 (p53ER<sup>TAM</sup>) mouse allele to generate Eµ-Myc-driven lymphomas in the presence of active p53 and, after full lymphoma establishment, switched off p53 to model late-stage p53 inactivation. 31611375

2019

Entrez Id: 595
Gene Symbol: CCND1
CCND1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE Lymphoma cell lines harboring the t(11;14) showed cyclin D1 protein but no or very low levels of cyclin D3; three other B-cell lines, a T-cell line, and peripheral blood lymphocytes strongly expressed cyclin D3 and reacted negatively for cyclin D1. 9376597

1997

Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE EBV- TCR- lymphoma showed less necrosis (P = 0.0133) and a better 2-year survival rate (P = 0.0066) than EBV+ TCR- lymphoma. 15139996

2004

Entrez Id: 648
Gene Symbol: BMI1
BMI1
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 AlteredExpression BEFREE A significant higher expression of B-lymphoma Moloney murine leukemia virus insertion region-1 (Bmi-1) has been reported in cell lines from metastatic melanoma compared to cell lines from primary melanoma. 27878257

2017

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE In addition, homozygous deletions of p15, p16 and p14 genes in 5 out of 31 samples were detected; 3 were from nasal NK cell lymphoma and 2 from blastic NK cell lymphoma / leukemia. 11676855

2001

Entrez Id: 3558
Gene Symbol: IL2
IL2
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE We assessed whether IL-2 had an impact on EBV replication and the development of lymphoma. 24007426

2014

Entrez Id: 604
Gene Symbol: BCL6
BCL6
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 Biomarker BEFREE Double-color FISH with IgH (Y6) and BCL6 (cosB5-1) showed fusion of BCL6 and IgH genes on der(3)t(3;14) in all nine patients, suggesting that der(3) may play a critical role in the development of lymphoma carrying complex as well as standard t(3;14) translocations. 9398863

1997

Entrez Id: 4311
Gene Symbol: MME
MME
CUI: C1332206
Disease: Adult Lymphoma
Adult Lymphoma
0.100 AlteredExpression BEFREE Here we describe an uncommon case of de novo MCL with expression of CD10, but not CD5, mimicking lymphoma of germinal center-derived B cells. 20490333

2010