Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE The HLA-DPB1*0401 allele, the PI*Z allele of the gene encoding α1-antitrypsin (SERPINA1) and the proteinase 3 (PRTN3) gene have been associated with GPA. 25172939

2015

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Among six patients without granuloma on nasal biopsy, three patients with only antineutrophil cytoplasmic antibody (ANCA) and chronic rhinosinusitis could be classified as GPA due to proteinase 3 (PR3)-ANCA (or cytoplasmic (C)-ANCA) positivity. 30887162

2019

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Proteinase 3 (PR3), the target antigen of antineutrophil cytoplasm autoantibodies, which are found in patients with Wegener granulomatosis, is a neutrophil serine protease localized within cytoplasmic granules. 18854317

2008

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Granuloma formation, as seen in PR3-ANCA-associated GPA, is not well explained by the presence of autoantibodies in experimental models.Here, T cells seem crucial. 23810690

2013

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Among antineutrophil cytoplasmic antibody (ANCA)-associated vasculitides (AAV), granulomatosis with polyangiitis (GPA) and proteinase 3-ANCA-positive AAV (PR3-AAV) are prevalent in European populations, while microscopic polyangiitis (MPA) and myeloperoxidase-ANCA-positive AAV (MPO-AAV) are predominant in the Japanese. 27166610

2016

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE All but one patient, who had concomitant C-ANCA seropositivity and granulomatosis with polyangiitis, had a favorable disease course with controlled inflammation using topical and/or systemic immunomodulatory therapy. 30230931

2019

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE This study excludes certain PR3 epitope variants as autoantigenic stimuli in WG, since the Val119Ile polymorphism showed no differences between patients and controls. 11115080

2000

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Association of ETS1 polymorphism with granulomatosis with polyangiitis and proteinase 3-anti-neutrophil cytoplasmic antibody positive vasculitis in a Japanese population. 29167552

2018

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE We examined five additional SNPs and a sixth SNP haplotype within the PRTN3 promoter region in a family-based association analysis and found no evidence that mutations within PRTN3 are associated with WG diagnosis. 16026591

2005

Entrez Id: 5657
Gene Symbol: PRTN3
PRTN3
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.600 GeneticVariation BEFREE Moreover, we identified genetic distinctions between granulomatosis with polyangiitis and microscopic polyangiitis and between proteinase 3 ANCA vasculitis and myeloperoxidase ANCA vasculitis. 26443607

2016

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE The previously reported strong association of WG with the HLA-DPB1*0401 allele was confirmed in an independent WG sample (n = 108, p(c) = 6.4 x 10(-8)). 17967832

2008

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE The rs3117242 of HLA-DPB1 could be considered a genetic risk factor for GPA in Chinese Han people. 26014903

2017

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation GWASDB Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775

2013

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE A trend toward increased frequency of DPB1*04:01, the risk allele for GPA in European populations, was observed among Japanese patients with PR3-AAV when conditioned on DRB1*13:02 (Padjusted = 0.0021, ORadjusted = 3.48). 27166610

2016

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation GWASCAT Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775

2013

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE In addition, these studies have also shown that different AAV subtypes such as granulomatosis with polyangiitis (Wegener's, GPA) and microscopic polyangiitis (MPA) are underpinned by distinct genetic risk factors, with GPA being associated with HLA-DP, SERPINA1 (encoding α1-antitrypsin), PRTN3 (encoding proteinase-3, PR3, the main GPA-related autoantigen) and SEMA6A (semaphorin 6A), whereas MPA has been mainly associated with HLA-DQ. 24854378

2014

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE In addition, an extended haplotype DPB1*0401/RXRB03 was identified showing an even stronger association with WG ( P=7.13x10(-17), OR=6.41). 14968360

2004

Entrez Id: 3115
Gene Symbol: HLA-DPB1
HLA-DPB1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.480 GeneticVariation BEFREE Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775

2013

Entrez Id: 3113
Gene Symbol: HLA-DPA1
HLA-DPA1
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.400 GeneticVariation GWASDB Association of granulomatosis with polyangiitis (Wegener's) with HLA-DPB1*04 and SEMA6A gene variants: evidence from genome-wide analysis. 23740775

2013

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation BEFREE Our results in American patients confirm findings from a Scandinavian cohort in which a positive association between WG and longer alleles of (AT)n in the Ctla4 3'-UTR was demonstrated. 15334480

2004

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation BEFREE The CTLA-4 SNP in the promoter region at position -318 is associated with WG. 12022356

2002

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation BEFREE Furthermore, the non-carriage of CTLA-4 allele 86 was associated with WG formation, while homocygotic carriage of the CCR5 allele delta 32 seemed to prevent ANCA-negative WG. 15675141

2004

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation BEFREE The distribution of cytokine and cytotoxic T cell antigen 4 (CTLA4) gene polymorphisms and HLA class II alleles was analysed in 32 patients with generalised WG and 91 healthy controls. 15708894

2005

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation BEFREE The disease is associated with expanded dinucleotide repeats in the cytotoxic T lymphocyte antigen 4 (CTLA-4) gene, suggesting that genetic variation(s) in T cell related gene(s) could contribute to the T cell hyperactivity in WG. 11838849

2002

Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
CUI: C3495801
Disease: Granulomatosis with polyangiitis
Granulomatosis with polyangiitis
0.360 GeneticVariation LHGDN Coding sequence 1 and promoter single nucleotide polymorphisms in the CTLA-4 gene in Wegener's granulomatosis. 12022356

2002