Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 174
Gene Symbol: AFP
AFP
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE Pineal ganglioglioma in a patient with familial basal ganglia calcification and elevated serum alpha-fetoprotein: case report. 7692346

1993

Entrez Id: 7249
Gene Symbol: TSC2
TSC2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE The selective detection of the TSC2 mutation within the glial component of a ganglioglioma suggests that the glioma portion has undergone clonal evolution in this case. 11437991

2001

Entrez Id: 7249
Gene Symbol: TSC2
TSC2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 Biomarker BEFREE The reelin signaling and tuberin/insulin growth receptor pathways have recently been implicated in ganglioglioma development. 12125736

2002

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.040 GeneticVariation BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754

2003

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 AlteredExpression BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754

2003

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 AlteredExpression BEFREE The present case is unusual in four aspects: (i) it arose from a low-grade ganglioglioma in the absence of previous radiation or chemotherapy, which is the fourth reported case; (ii) the original tumor showed a high proliferative index on flow cytometry but a low Ki-67 labeling index, implying that the application of flow cytometry might play a certain role in predicting biological and clinical behavior of low grade gangliogliomas; (iii) p53 mutation and deletion appeared in the secondary glioblastoma, which was not shown in the original well-differentiated ganglioglioma; and (iv) the transformed glioblastoma showed p16 inactivation detected by methylation and deletion, which are relatively uncommon genetic events in secondary glioblastomas. 14629754

2003

Entrez Id: 64324
Gene Symbol: NSD1
NSD1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Ganglioglioma in a Sotos syndrome patient with an NSD1 deletion. 15455365

2004

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.040 AlteredExpression BEFREE The authors report here the first unequivocal case of a ganglioglioma harboring aberrant TP53 product that was expressed predominantly in the neuronal component. 15925988

2005

Entrez Id: 1641
Gene Symbol: DCX
DCX
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 AlteredExpression BEFREE However, DCX was less intensely expressed in the circumscribed group of tumors (pilocytic astrocytoma, n=6; ependymoma/subependymoma, n=7; dysembryoplastic neuroepithelial tumor, n=4; ganglioglioma, n=2; meningioma, n=9; and schwannoma, n=9). 16195916

2005

Entrez Id: 7157
Gene Symbol: TP53
TP53
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.040 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.020 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 367
Gene Symbol: AR
AR
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE By using the human androgen receptor gene (HUMARA) assay, we found the ganglioglioma and the malignant component to be clonal in origin, suggestive of initial transformation of a single neuroglial precursor cell with subsequent malignant progression. 17259542

2007

Entrez Id: 115482685
Gene Symbol: H3P13
H3P13
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 1032
Gene Symbol: CDKN2D
CDKN2D
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 5967
Gene Symbol: REG1A
REG1A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 2158
Gene Symbol: F9
F9
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 51561
Gene Symbol: IL23A
IL23A
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE Direct analysis demonstrated loss of p19 expression and p53 mutation in the malignant areas, highly suggestive of these alterations being involved in the malignant progression of the ganglioglioma. 17259542

2007

Entrez Id: 27165
Gene Symbol: GLS2
GLS2
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 AlteredExpression BEFREE LGA mRNA was also relatively high in ganglioglioma which contains a discernable proportion of neuronal cells, and in oligodendroglioma. 17940881

2008

Entrez Id: 4683
Gene Symbol: NBN
NBN
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 GeneticVariation BEFREE This is the first patient with ganglioglioma and confirmed mutation in the NBN gene. 19813148

2009

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.200 GeneticVariation BEFREE BRAF V600E mutation, a genetic abnormality seen in a significant percentage of pleomorphic xanthoastrocytomas and GGs, was assessed by polymerase chain reaction and identified in the tumor. 22082607

2011

Entrez Id: 3417
Gene Symbol: IDH1
IDH1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.030 GeneticVariation BEFREE In this multi-institutional study, 98 cases originally diagnosed as ganglioglioma were analyzed for IDH1 mutations, 86 of which had follow-up data available. 21314850

2011

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.200 Biomarker BEFREE The single tumor lacking BRAF duplication or NF1 association had histologic features of a ganglioglioma. 22892521

2012

Entrez Id: 79813
Gene Symbol: EHMT1
EHMT1
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 Biomarker BEFREE Constitutional tandem duplication of 9q34 that truncates EHMT1 in a child with ganglioglioma. 21681934

2012

Entrez Id: 673
Gene Symbol: BRAF
BRAF
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.200 GeneticVariation BEFREE Mutant BRAF V600E protein in ganglioglioma is predominantly expressed by neuronal tumor cells. 23435618

2013

Entrez Id: 4255
Gene Symbol: MGMT
MGMT
CUI: C1332969
Disease: Childhood Ganglioglioma
Childhood Ganglioglioma
0.010 AlteredExpression BEFREE We assessed clinicopathological features of nine cases of low-grade GG to further elucidate the relationship between the status of the MGMT protein expression and the prognosis. 24374955

2013