Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5604
Gene Symbol: MAP2K1
MAP2K1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 Biomarker BEFREE Dual inhibitor therapy using dabrafenib (a selective oral inhibitor of several mutated forms of BRAF kinase) and trametinib (a reversible inhibitor of MEK1 and MEK2) has been used successfully for treatment of metastatic melanoma, anaplastic thyroid cancer, and other tumor types, but has been reported in only a few patients with primary brain tumors and none with pleomorphic xanthoastrocytoma. 31675726

2019

Entrez Id: 22882
Gene Symbol: ZHX2
ZHX2
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE We find that PXAs are genetically defined by the combination of CDKN2A biallelic inactivation and RAF alterations that were present in all 19 cases, most commonly as CDKN2A homozygous deletion and BRAF p.V600E mutation but also occasionally BRAF or RAF1 fusions or other rearrangements. 30051528

2019

Entrez Id: 5605
Gene Symbol: MAP2K2
MAP2K2
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 Biomarker BEFREE Dual inhibitor therapy using dabrafenib (a selective oral inhibitor of several mutated forms of BRAF kinase) and trametinib (a reversible inhibitor of MEK1 and MEK2) has been used successfully for treatment of metastatic melanoma, anaplastic thyroid cancer, and other tumor types, but has been reported in only a few patients with primary brain tumors and none with pleomorphic xanthoastrocytoma. 31675726

2019

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE The KRAS mutation in PXA is reported for the first time in these tumors. 30496796

2019

Entrez Id: 5594
Gene Symbol: MAPK1
MAPK1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE Genetic analysis to screen for MAPK/ERK pathway mutations is warranted on PXAs negative for the V600E mutation. 30517658

2019

Entrez Id: 2048
Gene Symbol: EPHB2
EPHB2
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE Genetic analysis to screen for MAPK/ERK pathway mutations is warranted on PXAs negative for the V600E mutation. 30517658

2019

Entrez Id: 2175
Gene Symbol: FANCA
FANCA
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE Because mutations of FANCA and BRAF and copy number variations of CDKN2A/B are more frequent in PXA than in glioblastoma, they might be used to distinguish the 2 tumors. 30496796

2019

Entrez Id: 9444
Gene Symbol: QKI
QKI
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE The tumor was negative for the V600E mutation, but 2 RNA sequencing platforms detected a QKI-RAF1 fusion (t(6; 3)(q26; p25)), which has not been previously reported in PXAs. 30517658

2019

Entrez Id: 5426
Gene Symbol: POLE
POLE
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE In post-hoc subgroup analysis, hypermutator tumors (mismatch repair deficiency and somatic POLE/POLD1 mutations) and those biologically resembling pleomorphic xanthoastrocytoma ([PXA]-like, driven by BRAF_V600E or NF1 mutation) had significantly more CD8<sup>+</sup> tumor-infiltrating lymphocytes, and longer survival with the addition of BEV. 29763623

2018

Entrez Id: 5424
Gene Symbol: POLD1
POLD1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE In post-hoc subgroup analysis, hypermutator tumors (mismatch repair deficiency and somatic POLE/POLD1 mutations) and those biologically resembling pleomorphic xanthoastrocytoma ([PXA]-like, driven by BRAF_V600E or NF1 mutation) had significantly more CD8<sup>+</sup> tumor-infiltrating lymphocytes, and longer survival with the addition of BEV. 29763623

2018

Entrez Id: 5817
Gene Symbol: PVR
PVR
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 AlteredExpression BEFREE CD155 was expressed in all 12 patient specimens and in PXA and medulloblastoma cell lines. 29878245

2018

Entrez Id: 5609
Gene Symbol: MAP2K7
MAP2K7
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE Additionally, a trial of a MEK inhibitor or tyrosine kinase inhibitor could be considered for PXA regardless of V600E mutation status. 30120661

2018

Entrez Id: 3020
Gene Symbol: H3-3A
H3-3A
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 Biomarker BEFREE Immunohistochemical and molecular biological assessment for isocitrate dehydrogenases 1 and 2 (IDH1/2), α-thalassemia/mental-retardation-syndrome-X-linked gene (ATRX), p53, BRAF, telomere reverse transcriptase promoter (TERT-p), H3F3A, and integrase interactor 1 (INI1) were performed. eGBM tended to lack the degenerative changes characteristic for PXA. 29532523

2018

Entrez Id: 3021
Gene Symbol: H3-3B
H3-3B
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 Biomarker BEFREE Immunohistochemical and molecular biological assessment for isocitrate dehydrogenases 1 and 2 (IDH1/2), α-thalassemia/mental-retardation-syndrome-X-linked gene (ATRX), p53, BRAF, telomere reverse transcriptase promoter (TERT-p), H3F3A, and integrase interactor 1 (INI1) were performed. eGBM tended to lack the degenerative changes characteristic for PXA. 29532523

2018

Entrez Id: 55714
Gene Symbol: TENM3
TENM3
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE ODZ3 deletion was detected in seven eGBMs and two ePXAs.EGFR amplification was absent. 26238627

2016

Entrez Id: 1956
Gene Symbol: EGFR
EGFR
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 Biomarker BEFREE ODZ3 deletion was detected in seven eGBMs and two ePXAs.EGFR amplification was absent. 26238627

2016

Entrez Id: 546
Gene Symbol: ATRX
ATRX
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE Both components were positive for the mutant IDH1 R132H and showed loss of ATRX expression, whereas BRAF V600E was restricted to the PXA-like component. 26414224

2016

Entrez Id: 10178
Gene Symbol: TENM1
TENM1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE ODZ3 deletion was detected in seven eGBMs and two ePXAs.EGFR amplification was absent. 26238627

2016

Entrez Id: 22858
Gene Symbol: CILK1
CILK1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 9020
Gene Symbol: MAP3K14
MAP3K14
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 9874
Gene Symbol: TLK1
TLK1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 5568
Gene Symbol: PRKACG
PRKACG
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 207
Gene Symbol: AKT1
AKT1
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 55872
Gene Symbol: PBK
PBK
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014

Entrez Id: 5127
Gene Symbol: CDK16
CDK16
CUI: C0334586
Disease: Pleomorphic Xanthoastrocytoma
Pleomorphic Xanthoastrocytoma
0.010 GeneticVariation BEFREE A valine-to-glutamic acid substitution at position 600 of the serine/threonine-protein kinase BRAF (BRAF V600E) mutation, which is commonly found in PXA, has recently been detected in approximately 50% of all epithelioid glioblastoma (GBM) cases. 24894018

2014