Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 Biomarker BEFREE HLA-B alleles showed fast off-rates in peptide binding and restricted high numbers (up to 6%) of antigen-specific CD8+ T cells in patients with pulmonary tuberculosis. 17429413

2007

Entrez Id: 7421
Gene Symbol: VDR
VDR
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE Vitamin D receptor gene polymorphisms and sputum conversion time in pulmonary tuberculosis patients. 17449323

2007

Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 Biomarker BEFREE HLA-DRB1 typing was done in normal healthy subjects (NHS: n = 156) and patients with pulmonary tuberculosis (PTB: n = 102) by polymerase chain reaction-based sequence-specific oligonucleotide hybridization method. 17845310

2007

Entrez Id: 3687
Gene Symbol: ITGAX
ITGAX
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 GeneticVariation BEFREE CD11c/Arg47Trp polymorphism is not associated with PTB. 19237023

2009

Entrez Id: 3586
Gene Symbol: IL10
IL10
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE IL10 haplotype associated with tuberculin skin test response but not with pulmonary TB. 19412539

2009

Entrez Id: 729230
Gene Symbol: CCR2
CCR2
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 GeneticVariation BEFREE CCR2 V64I (G/A), monocyte chemoattractant protein-1 (MCP-1) -2518 A/G, stromal cell derived factor-1alpha; (SDF-1alpha) 3'UTR G/A and DC-SIGN gene polymorphisms were studied by polymerase chain reaction based methods in HIV-1 infected patients without TB (n=151), with pulmonary TB (PTB) (n=81) and extrapulmonary TB (n=31), 155 PTB patients without HIV and 206 healthy controls. 19942750

2009

Entrez Id: 3458
Gene Symbol: IFNG
IFNG
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE Interferon gamma gene +874A/T polymorphism and intracellular interferon gamma expression in pulmonary tuberculosis. 20004112

2010

Entrez Id: 7097
Gene Symbol: TLR2
TLR2
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE TLR2 genetic polymorphisms influence susceptibility to pulmonary TB. 20113509

2010

Entrez Id: 3586
Gene Symbol: IL10
IL10
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE IL10(-1082)-IL10(-592) haplotypes showed different distributions among patients with pulmonary TB and all TB forms (P<0.01) when compared to healthy controls. 20188863

2010

Entrez Id: 3458
Gene Symbol: IFNG
IFNG
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 Biomarker BEFREE IFN-γ +874 genotype AA was significantly higher in patients with TB than that in control (Pc=0.015), in extrapulmonary than patients with pulmonary TB (PTB) (Pc=0.009), and young children with TB below 5 years (Pc=0.024). 20883321

2010

Entrez Id: 3586
Gene Symbol: IL10
IL10
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE IL-10-1082 G/G genotype did not exhibit significant association except for increased GG frequency in PTB. 20883321

2010

Entrez Id: 6556
Gene Symbol: SLC11A1
SLC11A1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE NRAMP1 polymorphisms (3'UTR, D543N, INT4) were evaluated among 142 patients with culture-positive pulmonary tuberculosis and 144 ethnically matched healthy controls having latent M. tuberculosis infection. 21169917

2011

Entrez Id: 92105
Gene Symbol: INTS4
INTS4
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.070 GeneticVariation BEFREE INT4-CC homozygotes were found to have a higher risk to develop pulmonary tuberculosis compared to GG homozygotes (p=0.022). 21169917

2011

Entrez Id: 7473
Gene Symbol: WNT3
WNT3
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.070 GeneticVariation BEFREE INT4-CC homozygotes were found to have a higher risk to develop pulmonary tuberculosis compared to GG homozygotes (p=0.022). 21169917

2011

Entrez Id: 3105
Gene Symbol: HLA-A
HLA-A
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.100 GeneticVariation BEFREE HLA-A and HLA-DRB1 amino acid polymorphisms are associated with susceptibility and protection to pulmonary tuberculosis in a Greek population. 22504415

2012

Entrez Id: 2669
Gene Symbol: GEM
GEM
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 Biomarker BEFREE KIR genes apparently have a role in resistance to pulmonary tuberculosis. 22653583

2012

Entrez Id: 3811
Gene Symbol: KIR3DL1
KIR3DL1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.030 Biomarker BEFREE KIR genes apparently have a role in resistance to pulmonary tuberculosis. 22653583

2012

Entrez Id: 8651
Gene Symbol: SOCS1
SOCS1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 AlteredExpression BEFREE SOCS1 gene expression is increased in severe pulmonary tuberculosis. 22670716

2012

Entrez Id: 1056
Gene Symbol: CEL
CEL
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 AlteredExpression BEFREE BAL samples from 424 patients with acid-fast bacillus-negative sputum smears who underwent bronchoscopy for diagnostic evaluations of pulmonary diseases, were prospectively analyzed for ADA activity and TB PCR. 22738791

2012

Entrez Id: 83666
Gene Symbol: PARP9
PARP9
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 AlteredExpression BEFREE BAL samples from 424 patients with acid-fast bacillus-negative sputum smears who underwent bronchoscopy for diagnostic evaluations of pulmonary diseases, were prospectively analyzed for ADA activity and TB PCR. 22738791

2012

Entrez Id: 10998
Gene Symbol: SLC27A5
SLC27A5
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.020 AlteredExpression BEFREE BAL samples from 424 patients with acid-fast bacillus-negative sputum smears who underwent bronchoscopy for diagnostic evaluations of pulmonary diseases, were prospectively analyzed for ADA activity and TB PCR. 22738791

2012

Entrez Id: 3806
Gene Symbol: KIR2DS1
KIR2DS1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 Biomarker BEFREE KIR2DS1 was increased in PTB when HLA-C group 2 alleles were missing. 22862677

2012

Entrez Id: 158401
Gene Symbol: SHOC1
SHOC1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 AlteredExpression BEFREE Zip2 mRNA level was significantly up-regulated in PTB patients (P=0.001), and Zip8 mRNA level was significantly down-regulated compared with control individuals (P<0.001). 23686108

2013

Entrez Id: 29986
Gene Symbol: SLC39A2
SLC39A2
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.010 AlteredExpression BEFREE Zip2 mRNA level was significantly up-regulated in PTB patients (P=0.001), and Zip8 mRNA level was significantly down-regulated compared with control individuals (P<0.001). 23686108

2013

Entrez Id: 7096
Gene Symbol: TLR1
TLR1
CUI: C0041327
Disease: Tuberculosis, Pulmonary
Tuberculosis, Pulmonary
0.060 GeneticVariation BEFREE Toll-like receptor -1, -2, and -6 polymorphisms and pulmonary tuberculosis susceptibility: a systematic review and meta-analysis. 23691034

2013