Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 6490
Gene Symbol: PMEL
PMEL
High-Grade Squamous Intraepithelial Lesions
0.040 GeneticVariation BEFREE A significant protective association was observed between the presence of the G(*)0103 allele and SIL and between the G0101/G0104 genotype and HSIL in the group of patients compared to control. 19407850

2009

Entrez Id: 6491
Gene Symbol: STIL
STIL
High-Grade Squamous Intraepithelial Lesions
0.040 GeneticVariation BEFREE A significant protective association was observed between the presence of the G(*)0103 allele and SIL and between the G0101/G0104 genotype and HSIL in the group of patients compared to control. 19407850

2009

Entrez Id: 412
Gene Symbol: STS
STS
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE A substantial subset of patients with ASC-H interpretations is associated with an appreciable risk of clinically significant cervical disease. p16/Ki67 dual stain can provide additional valuable information that may lead to higher-quality management of women with ASC-H, especially when initial colposcopy or biopsy results do not show HSIL lesions. 28244884

2017

Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE A substantial subset of patients with ASC-H interpretations is associated with an appreciable risk of clinically significant cervical disease. p16/Ki67 dual stain can provide additional valuable information that may lead to higher-quality management of women with ASC-H, especially when initial colposcopy or biopsy results do not show HSIL lesions. 28244884

2017

Entrez Id: 3240
Gene Symbol: HP
HP
High-Grade Squamous Intraepithelial Lesions
0.010 GeneticVariation BEFREE A total of 492 Caucasian women, 196 pathologic [high-grade squamous intraepithelial lesions and invasive cervical cancer (HSIL + ICC)], ranging in age from 18 to 81 years, were phenotyped for plasma Hp using a polyacrylamide gel electrophoresis method. 19446743

2009

Entrez Id: 4790
Gene Symbol: NFKB1
NFKB1
High-Grade Squamous Intraepithelial Lesions
0.010 Biomarker BEFREE A very high expression of nuclear factor-kappa B protein (nuclear p50, encoded by NFKB1) in high-grade squamous intraepithelial lesion and invasive cancers has been observed. 19892748

2010

Entrez Id: 6490
Gene Symbol: PMEL
PMEL
High-Grade Squamous Intraepithelial Lesions
0.040 GeneticVariation BEFREE AAV appears to interact with HPV to reduce SIL risk; relative to the HPV-/AAV+ exposure, the respective aORs for HSIL and HPV+/AAV-, HPV+/AAV+, and HPV-/AAV+ were 17.0, 6.9, and 3.5. 11263951

2001

Entrez Id: 6491
Gene Symbol: STIL
STIL
High-Grade Squamous Intraepithelial Lesions
0.040 GeneticVariation BEFREE AAV appears to interact with HPV to reduce SIL risk; relative to the HPV-/AAV+ exposure, the respective aORs for HSIL and HPV+/AAV-, HPV+/AAV+, and HPV-/AAV+ were 17.0, 6.9, and 3.5. 11263951

2001

Entrez Id: 406988
Gene Symbol: MIR205
MIR205
High-Grade Squamous Intraepithelial Lesions
0.010 AlteredExpression BEFREE Accuracy analyses indicated that high miR-205 expression had a significantly higher specificity to high-risk HPV testing, and a sensitivity similar to that of high-risk HPV testing to predict CIN2+ and CIN3+ in women with LSIL, but not those with high-grade squamous intraepithelial lesions. 28529583

2017

Entrez Id: 5075
Gene Symbol: PAX1
PAX1
High-Grade Squamous Intraepithelial Lesions
0.040 PosttranslationalModification BEFREE ADCYAP1 and PAX1 also trended toward elevated methylation levels in HSIL samples, although the levels were much lower than those in cancer cells. 26768780

2016

Entrez Id: 4843
Gene Symbol: NOS2
NOS2
High-Grade Squamous Intraepithelial Lesions
0.020 Biomarker BEFREE All ASCUS cases were subclassified according to TBS 1991 into the following categories: favor reactive (ASCUS-R), favor LSIL (ASCUS-L), favor HSIL (ASCUS-H), and not otherwise specified (ASCUS-NOS). 15086283

2004

Entrez Id: 4842
Gene Symbol: NOS1
NOS1
High-Grade Squamous Intraepithelial Lesions
0.020 Biomarker BEFREE All ASCUS cases were subclassified according to TBS 1991 into the following categories: favor reactive (ASCUS-R), favor LSIL (ASCUS-L), favor HSIL (ASCUS-H), and not otherwise specified (ASCUS-NOS). 15086283

2004

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE All cases of HSIL were positive for both p16 and Ki-67. 17824788

2007

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE All cases of HSIL were positive for both p16 and Ki-67. 17824788

2007

Entrez Id: 406947
Gene Symbol: MIR155
MIR155
High-Grade Squamous Intraepithelial Lesions
0.010 AlteredExpression BEFREE Although non- significant, there was an increasing trend in the miR-155 fold expression from negative samples to HSIL, with the highest fold expression increase in both LSIL and HSIL compared to the other miRNAs. 30728437

2019

Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Although patients found to have atypical squamous cells of undetermined significance (ASC-US) and low-grade squamous intraepithelial lesions (LSILs) on Papanicolaou (Pap) testing are treated conservatively, 5.2% to 18.8% of them progress to high-grade squamous intraepithelial lesions (HSILs). 26335500

2016

Entrez Id: 412
Gene Symbol: STS
STS
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Although patients found to have atypical squamous cells of undetermined significance (ASC-US) and low-grade squamous intraepithelial lesions (LSILs) on Papanicolaou (Pap) testing are treated conservatively, 5.2% to 18.8% of them progress to high-grade squamous intraepithelial lesions (HSILs). 26335500

2016

Entrez Id: 6347
Gene Symbol: CCL2
CCL2
High-Grade Squamous Intraepithelial Lesions
0.010 AlteredExpression BEFREE Although preliminary, our observations lend support to the suggestion that the experimental model of transcriptional regulation and exclusion of either HPV E6/E7 or MCP-1 expression is especially pertinent to high-grade SIL, whereas in most SCCs, other environmental factors may influence this relationship. 8909236

1996

Entrez Id: 4609
Gene Symbol: MYC
MYC
High-Grade Squamous Intraepithelial Lesions
0.010 Biomarker BEFREE An increased MYC and/or TERC gene copy number (>2 signals in>10% of cells) prevailed in 43% of ASCUS specimens and was more frequent in HSIL (85%) than in LSIL (33%) (HSIL vs LSIL: P<.0001). 23408758

2013

Entrez Id: 7012
Gene Symbol: TERC
TERC
High-Grade Squamous Intraepithelial Lesions
0.010 Biomarker BEFREE An increased MYC and/or TERC gene copy number (>2 signals in>10% of cells) prevailed in 43% of ASCUS specimens and was more frequent in HSIL (85%) than in LSIL (33%) (HSIL vs LSIL: P<.0001). 23408758

2013

Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
High-Grade Squamous Intraepithelial Lesions
0.030 Biomarker BEFREE Analysis of peripheral blood lymphocytes obtained from 14 HLA-DQB1*02 patients with HPV-16+ HSILs showed that the HPV-16+ E7 peptide (aa 71-85)-specific CD4+ T-cell immune response was significantly higher in the group of patients with regression compared with the patients without regression (P value <0.05). 17438108

2007

Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Biomarker p16 is the strongest predictor for anal LSIL-to-HSIL progression, outperforming other risk factors. 30005024

2018

Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Biomarker p16 is the strongest predictor for anal LSIL-to-HSIL progression, outperforming other risk factors. 30005024

2018

Entrez Id: 412
Gene Symbol: STS
STS
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Both AHPV and Cobas were equally sensitive in detecting high-grade SIL in both scenarios of screening and ASC-US or AGC triage but AHPV showed a higher specificity. 30368218

2018

Entrez Id: 29108
Gene Symbol: PYCARD
PYCARD
High-Grade Squamous Intraepithelial Lesions
0.100 Biomarker BEFREE Both AHPV and Cobas were equally sensitive in detecting high-grade SIL in both scenarios of screening and ASC-US or AGC triage but AHPV showed a higher specificity. 30368218

2018