Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
CUI: C0040100
Disease: Thymoma
Thymoma
0.040 GeneticVariation BEFREE The DRB1*03 allele was absent in patients with thymoma; however, in comparison with controls, occurrence of this marker was frequent in MG patients (p<0.005; RR=6.2), more frequent in females (p<0.005; RR=7.8) and most frequent in EOMG female patients (p<0.005; RR=15.1). 11574100

2001

Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
CUI: C0040100
Disease: Thymoma
Thymoma
0.040 GeneticVariation BEFREE Cancer was found in 44% of LGI1-IgG/CASPR2-IgG dual seropositive patients (one-third thymoma). 28628235

2017

Entrez Id: 3117
Gene Symbol: HLA-DQA1
HLA-DQA1
CUI: C0040100
Disease: Thymoma
Thymoma
0.040 GeneticVariation BEFREE In contrast, no obvious association of HLA-DQA1, DQB1, DRB1 and DPB1 alleles with either late-onset patients or patients with thymoma was observed. 7749041

1994

Entrez Id: 26191
Gene Symbol: PTPN22
PTPN22
CUI: C0040100
Disease: Thymoma
Thymoma
0.030 GeneticVariation BEFREE DNA samples from 416 patients with clinically diagnosed generalized MG (231 with Abs to acetylcholine receptor, AChR-MG), 53 with Abs to muscle-specific kinase (MuSK-MG), 55 patients with no detectable Abs (SN-MG), 77 patients with thymoma (TAMG) and 293 healthy controls (HC) were genotyped for the SNP (PTPN22 rs2476601" genes_norm="26191">R620W, C1858T, rs2476601). 25119822

2014

Entrez Id: 129831
Gene Symbol: RBM45
RBM45
CUI: C0040100
Disease: Thymoma
Thymoma
0.030 GeneticVariation BEFREE The DRB1*03 allele was absent in patients with thymoma; however, in comparison with controls, occurrence of this marker was frequent in MG patients (p<0.005; RR=6.2), more frequent in females (p<0.005; RR=7.8) and most frequent in EOMG female patients (p<0.005; RR=15.1). 11574100

2001

Entrez Id: 129831
Gene Symbol: RBM45
RBM45
CUI: C0040100
Disease: Thymoma
Thymoma
0.030 GeneticVariation BEFREE The DRB1*1202 haplotype was associated with thymoma, older onset patients, ocular lesions, and mid to high anti-AchR titres. 8508049

1993

Entrez Id: 26191
Gene Symbol: PTPN22
PTPN22
CUI: C0040100
Disease: Thymoma
Thymoma
0.030 GeneticVariation BEFREE We conclude that the PTPN22(gain-of-function) variant biases towards MG in a subgroup of thymoma patients possibly by impeding central tolerance induction. 19693092

2009

Entrez Id: 4049
Gene Symbol: LTA
LTA
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE On the other hand, in MG patients with thymoma we found a positive association with the TNFB*2/2 genotype (RR: 5.6; P < 0.01) and a negative association with the TNFB*1 allele (RR: 0.3; P < 0.05) and *1/2 genotype (RR: 0.2; P < 0.01). 9949945

1998

Entrez Id: 2969
Gene Symbol: GTF2I
GTF2I
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE We identified recurrent somatic mutations in TET2, CYLD, SETD2, TP53, FBXW7, HRAS and RB1, and no mutations in GTF2I, supporting the hypothesis that TC and thymoma are distinguishable by their genetic profiles. 28968686

2017

Entrez Id: 6772
Gene Symbol: STAT1
STAT1
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE A gel mobility shift assay however, revealed translocation of STAT1 to the nucleus in thymoma as well as normal TEC. 10886240

2000

Entrez Id: 650
Gene Symbol: BMP2
BMP2
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE In the two thymoma patients in our family, targeted sequencing of RAD51L1 and BMP2 genes in and near the translocation site of chromosome 14 and 20 previously reported in two thymoma families, did not find any pathogenic mutation. 26344711

2015

Entrez Id: 3845
Gene Symbol: KRAS
KRAS
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE One thymoma and one thymic carcinoma harbored KRAS mutations (G12A and G12V, respectively), and one thymoma had a G13V HRAS mutation. 19861435

2009

Entrez Id: 4893
Gene Symbol: NRAS
NRAS
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE Reverse-phase protein array analysis of phospho-proteomic changes in mutant NRAS melanoma in response to trametinib indicated a compensatory increase in v-akt murine thymoma viral oncogene homolog signaling and decreased expression of mitogen-inducible gene 6 (MIG6), a negative regulator of epidermal growth factor receptor/v-erb-b2 erythroblastic leukemia viral oncogene homolog receptors. 26967478

2016

Entrez Id: 2969
Gene Symbol: GTF2I
GTF2I
CUI: C0040100
Disease: Thymoma
Thymoma
0.020 GeneticVariation BEFREE In a series of 274 TETs, we detected the GTF2I mutation in 82% of type A and 74% of type AB thymomas but rarely in the aggressive subtypes, where recurrent mutations of known cancer genes have been identified. 24974848

2014

Entrez Id: 54880
Gene Symbol: BCOR
BCOR
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE TP53 and BCOR were the most frequently mutated genes in TCA and B3 thymomas, respectively. 25299233

2015

Entrez Id: 7128
Gene Symbol: TNFAIP3
TNFAIP3
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE The distribution of TNFAIP3 gene rs7749323*A allele of late onset MG (LOMG, with positive acetylcholine receptor antibody and without thymoma) subgrouped patients was also significantly higher than that of gender- and age-matched healthy controls (7.4% vs 2.4%, odds ratio [OR] = 3.27, 95% confidence interval [CI] 1.01-10.6, P = .04). 28514294

2017

Entrez Id: 6777
Gene Symbol: STAT5B
STAT5B
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE This activity was coupled with inhibition of phosphorylation of the key JAK2(V617F)-dependent downstream signaling effectors signal transducer and activator of transcription (STAT)3, STAT5, and v-akt murine thymoma viral oncogene homolog (AKT). 18482053

2008

Entrez Id: 9211
Gene Symbol: LGI1
LGI1
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE Cancer was found in 44% of LGI1-IgG/CASPR2-IgG dual seropositive patients (one-third thymoma). 28628235

2017

Entrez Id: 3717
Gene Symbol: JAK2
JAK2
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE This activity was coupled with inhibition of phosphorylation of the key JAK2(V617F)-dependent downstream signaling effectors signal transducer and activator of transcription (STAT)3, STAT5, and v-akt murine thymoma viral oncogene homolog (AKT). 18482053

2008

Entrez Id: 29072
Gene Symbol: SETD2
SETD2
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE Genes in histone modification [BAP1 (n = 6; 13%), SETD2 (n = 5; 11%), ASXL1 (n = 2; 4%)], chromatin remodeling [SMARCA4 (n = 2; 4%)], and DNA methylation [DNMT3A (n = 3; 7%), TET2 (n = 2; 4%), WT1 (n = 2; 4%)] pathways were recurrently mutated in TCs, but not in thymomas. 25482724

2014

Entrez Id: 54790
Gene Symbol: TET2
TET2
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE Genes in histone modification [BAP1 (n = 6; 13%), SETD2 (n = 5; 11%), ASXL1 (n = 2; 4%)], chromatin remodeling [SMARCA4 (n = 2; 4%)], and DNA methylation [DNMT3A (n = 3; 7%), TET2 (n = 2; 4%), WT1 (n = 2; 4%)] pathways were recurrently mutated in TCs, but not in thymomas. 25482724

2014

Entrez Id: 859
Gene Symbol: CAV3
CAV3
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE Rare cases of acquired rippling muscle disease with abnormal caveolin-3 localisation have been reported, without primary caveolin-3 mutations and in association with myasthenia gravis and acetylcholine receptor autoantibodies, or thymoma. 21295981

2011

Entrez Id: 1017
Gene Symbol: CDK2
CDK2
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE A polymorphism in the 3' untranslated region of exon 3 of CDKN2 was detected in 5 cases of thymoma. 9398039

1997

Entrez Id: 6776
Gene Symbol: STAT5A
STAT5A
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE This activity was coupled with inhibition of phosphorylation of the key JAK2(V617F)-dependent downstream signaling effectors signal transducer and activator of transcription (STAT)3, STAT5, and v-akt murine thymoma viral oncogene homolog (AKT). 18482053

2008

Entrez Id: 51478
Gene Symbol: HSD17B7
HSD17B7
CUI: C0040100
Disease: Thymoma
Thymoma
0.010 GeneticVariation BEFREE Intratumoral E(2) concentrations were inversely correlated with EST, positively correlated with STS or 17beta-HSD type 1, and significantly higher in lower-grade or early-stage thymoma. 16166425

2005