Gene Disease Score gda Association Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
Selective immunoglobulin A deficiency
0.320 Biomarker GENOMICS_ENGLAND Epistatic interactions between mutations of TACI (TNFRSF13B) and TCF3 result in a severe primary immunodeficiency disorder and systemic lupus erythematosus. 29114388

2017

Entrez Id: 3586
Gene Symbol: IL10
IL10
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Genetically determined increased production of TNF-alpha and reduction of IL-10 may be relevant for susceptibility to CD, mainly in IgAD, as the different allele expression at TNF and IL-10 loci seems to influence cytokine production profile. 12738467

2003

Entrez Id: 10986
Gene Symbol: IGAD1
IGAD1
Selective immunoglobulin A deficiency
0.030 GeneticVariation BEFREE Haplotype analysis, linkage disequilibrium, and homozygosity mapping indicated that HLA-DQ/DR is the major IGAD1 locus, strongly suggesting the autoimmune pathogenesis of IgAD/CVID. 12594308

2003

Entrez Id: 54106
Gene Symbol: TLR9
TLR9
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Here, we analyze the phenotype and function of T and B cells in individuals with IgAD following IgA-inducing CpG-TLR9 stimulations. 29755476

2018

Entrez Id: 3567
Gene Symbol: IL5
IL5
Selective immunoglobulin A deficiency
0.020 Biomarker BEFREE Hypothesis: interleukin-5 production impairment can be a key point in the pathogenesis of the MHC-linked selective IgA deficiency. 9609136

1998

Entrez Id: 639
Gene Symbol: PRDM1
PRDM1
Selective immunoglobulin A deficiency
0.010 GeneticVariation BEFREE In conclusion, the polymorphisms studied in the PRDM1 and XBP1 genes do not seem to be involved in IgAD predisposition in the Spanish population. 19735688

2009

Entrez Id: 7494
Gene Symbol: XBP1
XBP1
Selective immunoglobulin A deficiency
0.010 GeneticVariation BEFREE In conclusion, the polymorphisms studied in the PRDM1 and XBP1 genes do not seem to be involved in IgAD predisposition in the Spanish population. 19735688

2009

Entrez Id: 3569
Gene Symbol: IL6
IL6
Selective immunoglobulin A deficiency
0.020 GeneticVariation BEFREE In conclusion, we described for the first time an association between IL6 polymorphisms and IgAD. 18486766

2008

Entrez Id: 7124
Gene Symbol: TNF
TNF
Selective immunoglobulin A deficiency
0.020 GeneticVariation BEFREE In this study we have examined IgAD association with TNF-alpha gene promoter polymorphisms and TNFa and b microsatellites. 10852388

2000

Entrez Id: 930
Gene Symbol: CD19
CD19
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Moreover, spontaneous apoptosis of CD19(+) B cells from patients with CVID or IgAD was prevented by a combination of IL-21, IL-4, and anti-CD40 stimulation. 19738033

2009

Entrez Id: 10986
Gene Symbol: IGAD1
IGAD1
Selective immunoglobulin A deficiency
0.030 Biomarker BEFREE Of 110 haplotypes shared by 258 affected family members, a single haplotype (H1) was found in 44 pairs of affected relatives, accounting for the majority of the IGAD1 contribution to the development of IgAD/CVID in our families. 10754342

2000

Entrez Id: 3569
Gene Symbol: IL6
IL6
Selective immunoglobulin A deficiency
0.020 AlteredExpression BEFREE On day 0, the IgA+ patient expressed interleukin (IL)-4 and IL-10, but not IL-2, IFN-gamma, or IL-6 mRNA; the IgA- patient expressed IL-6 and IL-10 mRNA, but not IL-4, IL-2, or IFN-gamma mRNA. 16386644

2005

Entrez Id: 64135
Gene Symbol: IFIH1
IFIH1
Selective immunoglobulin A deficiency
0.130 GeneticVariation BEFREE Our genome-wide association study (GWAS) meta-analysis of 1,635 patients with IgAD and 4,852 controls identified four new significant (P < 5 × 10<sup>-8</sup>) loci and association with a rare IFIH1 variant (p.Ile923Val). 27723758

2016

Entrez Id: 10986
Gene Symbol: IGAD1
IGAD1
Selective immunoglobulin A deficiency
0.030 GeneticVariation BEFREE Our previous linkage analysis of 83 multiple-case IgAD/CVID families containing 449 informative pedigree members showed a significantly increased allele sharing in the chromosome region 6p21 consistent with allelic associations in family-based and case-control studies and provided the evidence for a predisposing locus, termed IGAD1, in the proximal part of the MHC. 10438966

1999

Entrez Id: 175
Gene Symbol: AGA
AGA
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Patients with elevated EMA, or AGA-IgG elevation and selective IgA deficiency, were advised to undergo small intestinal biopsy. 10636980

2000

Entrez Id: 653361
Gene Symbol: NCF1
NCF1
Selective immunoglobulin A deficiency
0.010 GeneticVariation BEFREE Persistent antigen stimulation due to an inherent defect in the ability of the immune system to eradicate pathogens is the primary cause leading to autoimmunity in patients with primary immunodeficiency states.We describe a 10 year old Iranian girl with chronic granulomatous disease -the autosomal recessive type with mutation of NCF1 gene P47- associated with selective IgA deficiency, refractory immune thrombocytopenia that showed an excellent response to Rituximab (Anti-CD20 monoclonal antibody).Patients with primary immunodeficiencies may have variable autoimmune manifestations. 18780954

2008

Entrez Id: 54474
Gene Symbol: KRT20
KRT20
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Persistent antigen stimulation due to an inherent defect in the ability of the immune system to eradicate pathogens is the primary cause leading to autoimmunity in patients with primary immunodeficiency states.We describe a 10 year old Iranian girl with chronic granulomatous disease -the autosomal recessive type with mutation of NCF1 gene P47- associated with selective IgA deficiency, refractory immune thrombocytopenia that showed an excellent response to Rituximab (Anti-CD20 monoclonal antibody).Patients with primary immunodeficiencies may have variable autoimmune manifestations. 18780954

2008

Entrez Id: 931
Gene Symbol: MS4A1
MS4A1
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Persistent antigen stimulation due to an inherent defect in the ability of the immune system to eradicate pathogens is the primary cause leading to autoimmunity in patients with primary immunodeficiency states.We describe a 10 year old Iranian girl with chronic granulomatous disease -the autosomal recessive type with mutation of NCF1 gene P47- associated with selective IgA deficiency, refractory immune thrombocytopenia that showed an excellent response to Rituximab (Anti-CD20 monoclonal antibody).Patients with primary immunodeficiencies may have variable autoimmune manifestations. 18780954

2008

Entrez Id: 3107
Gene Symbol: HLA-C
HLA-C
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE Recent studies in patients with late-onset hypogammaglobulinaemia and selective IgA deficiency showed that there may be a common denominator for these two syndromes, since there is a close association with polymorphic antigens of the MHC class III region. 1791882

1991

Entrez Id: 7124
Gene Symbol: TNF
TNF
Selective immunoglobulin A deficiency
0.020 Biomarker BEFREE The aim of this study was to evaluate the role of tumor necrosis factor (TNF) and interleukin (IL)-10 alleles in CD and CD-IgAD. 12738467

2003

Entrez Id: 10673
Gene Symbol: TNFSF13B
TNFSF13B
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE The aim of this study was to investigate whether autoantibodies against BAFF (important B cell survival signal), APRIL (important plasma cell survival signal), or Interleukin-21 (important cytokine for immunoglobulin class switch) present an alternative mechanism for the development of the following primary antibody deficiencies (PADs): common variable immune deficiency (CVID) or selective IgA deficiency (sIgAD). 28651547

2017

Entrez Id: 8741
Gene Symbol: TNFSF13
TNFSF13
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE The aim of this study was to investigate whether autoantibodies against BAFF (important B cell survival signal), APRIL (important plasma cell survival signal), or Interleukin-21 (important cytokine for immunoglobulin class switch) present an alternative mechanism for the development of the following primary antibody deficiencies (PADs): common variable immune deficiency (CVID) or selective IgA deficiency (sIgAD). 28651547

2017

Entrez Id: 10541
Gene Symbol: ANP32B
ANP32B
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE The aim of this study was to investigate whether autoantibodies against BAFF (important B cell survival signal), APRIL (important plasma cell survival signal), or Interleukin-21 (important cytokine for immunoglobulin class switch) present an alternative mechanism for the development of the following primary antibody deficiencies (PADs): common variable immune deficiency (CVID) or selective IgA deficiency (sIgAD). 28651547

2017

Entrez Id: 57379
Gene Symbol: AICDA
AICDA
Selective immunoglobulin A deficiency
0.010 GeneticVariation BEFREE The less frequent genotype of AICDA in IgAD patients was AA, seen in 10.5% of the patients, which was much lower than the 30.8% in CVID patients and 38.2% in the controls. 23731676

2015

Entrez Id: 3106
Gene Symbol: HLA-B
HLA-B
Selective immunoglobulin A deficiency
0.010 Biomarker BEFREE There are strong indications for involvement of genetic factors in development of the disease and the frequency of several extended major histocompatibility complex haplotypes (including HLA-A1, B8, DR3, DQ2) have previously been shown to be increased among Caucasian patients with IgAD.PCR was used to type HLA B, DR, and DQ alleles in 29 Iranian individuals with IgAD and 299 Swedish individuals with IgAD.The results indicate a strong association with the HLA B14, DR1 alleles in Iranian subjects and HLA B8, B12, B13, B14, B40, DR1, DR3, DR7, DQ2 and DQ5 alleles in Swedish subjects.Differences in HLA association of IgAD in Iran and Sweden confirm the notion of a genetic background of the disease and that multiple, potentially different genes within the MHC region might be involved in the pathogenesis of IgAD in different ethnic groups. 19052350

2008