Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1801274
rs1801274
FCGR2A
0.597 0.800 1 161509955 missense variant A/C;G snv 4.0E-06; 0.48
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.850 1.000 4 2009 2018
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.730 1.000 1 2011 2016
dbSNP: rs4986790
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 0.923 1 2004 2017
dbSNP: rs10889677
rs10889677
IL23R
0.627 0.720 1 67259437 3 prime UTR variant C/A snv 0.27
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.820 1.000 1 2009 2020
dbSNP: rs11209026
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.900 1.000 3 2007 2020
dbSNP: rs1883832
rs1883832
CD40
0.581 0.680 20 46118343 5 prime UTR variant T/C snv 0.75 0.80
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.720 0.667 1 2010 2017
dbSNP: rs1260326
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2016 2016
dbSNP: rs2066845
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 0.846 1 2002 2018
dbSNP: rs3184504
rs3184504
ATXN2 ; SH2B3
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2016 2016
dbSNP: rs7517847
rs7517847
IL23R ; C1orf141
0.689 0.600 1 67215986 intron variant T/G snv 0.37
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.730 1.000 1 2008 2016
dbSNP: rs6920220
rs6920220 		0.742 0.440 6 137685367 intron variant G/A snv 0.16
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 1.000 3 2011 2017
dbSNP: rs1800682
rs1800682
ACTA2 ; FAS
0.637 0.440 10 88990206 non coding transcript exon variant A/G snv 0.54
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2016 2016
dbSNP: rs1893217
rs1893217
PTPN2
0.742 0.440 18 12809341 intron variant A/G snv 0.12
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.720 1.000 1 2014 2016
dbSNP: rs2104286
rs2104286
IL2RA
0.662 0.440 10 6057082 intron variant T/C snv 0.18
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2016 2016
dbSNP: rs2201841
rs2201841
IL23R ; C1orf141
0.716 0.440 1 67228519 intron variant A/G;T snv
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.820 1.000 1 2010 2017
dbSNP: rs9268853
rs9268853
HLA-DRB9
0.790 0.440 6 32461866 intron variant T/C snv 0.29
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 1.000 1 2011 2011
dbSNP: rs4246905
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 1.000 3 2011 2015
dbSNP: rs727088
rs727088
CD226
0.790 0.400 18 69863203 3 prime UTR variant G/A snv 0.47
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2015 2015
dbSNP: rs2395185
rs2395185
HLA-DRB9
0.724 0.360 6 32465390 intron variant G/T snv 0.29
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.810 1.000 3 2009 2012
dbSNP: rs11230563
rs11230563
CD6 ; LOC105369326
0.790 0.360 11 61008737 missense variant C/G;T snv 4.2E-06; 0.31
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 2 2015 2016
dbSNP: rs12720356
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 2 2015 2016
dbSNP: rs12232497
rs12232497 		0.701 0.360 17 39883866 intergenic variant T/C snv 0.35
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2015 2015
dbSNP: rs2872507
rs2872507 		0.752 0.360 17 39884510 intergenic variant G/A;T snv
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.810 1.000 1 2011 2012
dbSNP: rs3747517
rs3747517
IFIH1
0.732 0.360 2 162272314 missense variant T/C snv 0.68 0.68
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.700 1.000 1 2016 2016
dbSNP: rs4077515
rs4077515
CARD9
0.763 0.360 9 136372044 missense variant C/A;T snv 4.0E-06; 0.41
CUI: C0009324
Disease: Ulcerative Colitis
Ulcerative Colitis 		0.800 1.000 1 2010 2010