Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs779179533
rs779179533
TP63
1.000 0.080 3 189808322 missense variant G/C snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 1999 1999
dbSNP: rs121913409
rs121913409
CTNNB1
0.708 0.400 3 41224646 missense variant C/A;G;T snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2001 2001
dbSNP: rs1799802
rs1799802
ERCC4
0.925 0.200 16 13934224 missense variant C/T snv 4.0E-03 4.6E-03
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2001 2001
dbSNP: rs4880
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2004 2004
dbSNP: rs1394960893
rs1394960893
GSTP1
0.807 0.240 11 67586553 synonymous variant C/T snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs33917957
rs33917957
MET
0.790 0.120 7 116700208 missense variant A/G snv 2.7E-02 1.8E-02
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs376919235
rs376919235
MPO
1.000 0.080 17 58279366 synonymous variant A/G snv 1.4E-05 7.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs55985569
rs55985569
MET
0.925 0.080 7 116699588 missense variant G/A;T snv 3.7E-03
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs772309774
rs772309774
RARB
1.000 0.080 3 25593661 synonymous variant T/C snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs776310470
rs776310470
DAP
1.000 0.080 5 10680713 synonymous variant G/A snv 4.6E-04 5.8E-04
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2005 2005
dbSNP: rs1060503460
rs1060503460
NBN
0.925 0.200 8 89955461 missense variant A/T snv
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs1180868926
rs1180868926
OGG1 ; CAMK1
0.925 0.200 3 9757095 missense variant A/G snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs1181005582
rs1181005582
MPG ; NPRL3
0.925 0.200 16 85767 missense variant C/T snv 7.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs1225118391
rs1225118391
AGT
0.925 0.200 1 230710637 missense variant T/C snv 4.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs139002770
rs139002770
ERCC2
0.925 0.200 19 45352772 missense variant C/T snv 8.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs1436873982
rs1436873982
XRCC1
0.925 0.200 19 43552212 missense variant G/A snv 8.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs144271525
rs144271525
NLRP2
0.925 0.200 19 54983044 missense variant C/T snv 1.7E-04 3.4E-04
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs146084801
rs146084801
NLRP2
0.925 0.200 19 54983245 missense variant C/T snv 4.4E-05 1.5E-04
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs148298598
rs148298598
APEX1
0.925 0.200 14 20457111 missense variant G/A snv 2.3E-04 2.1E-04
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs148576448
rs148576448
MPG ; NPRL3
0.925 0.200 16 85461 missense variant G/A snv 8.0E-05 8.4E-05
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs199475643
rs199475643
PAH
0.882 0.240 12 102894894 missense variant T/C snv 8.0E-06
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs2227928
rs2227928
ATR
0.851 0.200 3 142562770 missense variant A/G snv 0.55 0.63
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs2237857
rs2237857
FANCG
0.925 0.200 9 35076758 missense variant G/A snv 1.5E-02 3.0E-02
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs2307486
rs2307486
APEX1 ; OSGEP
0.790 0.240 14 20456045 missense variant A/G snv 7.4E-03 2.1E-03
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006
dbSNP: rs3218536
rs3218536
XRCC2
0.620 0.440 7 152648922 missense variant C/G;T snv 4.0E-06; 6.4E-02
CUI: C0007131
Disease: Non-Small Cell Lung Carcinoma
Non-Small Cell Lung Carcinoma 		0.010 1.000 1 2006 2006