Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs11209026
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.900 0.944 6 2006 2020
dbSNP: rs2076756
rs2076756
NOD2
0.882 0.040 16 50722970 intron variant A/G snv 0.17
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 5 2007 2019
dbSNP: rs212388
rs212388
LOC105378083 ; LOC112267968
0.827 0.240 6 159069404 intron variant C/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 5 2010 2017
dbSNP: rs3197999
rs3197999
APEH ; MST1
0.732 0.280 3 49684099 missense variant G/A snv 0.26 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.830 1.000 5 2008 2017
dbSNP: rs6651252
rs6651252
LINC00824
0.790 0.200 8 128554935 intron variant T/C snv 0.19
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 5 2010 2019
dbSNP: rs11742570
rs11742570 		0.925 0.040 5 40410482 upstream gene variant T/C;G snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2010 2017
dbSNP: rs17293632
rs17293632
SMAD3
0.763 0.240 15 67150258 intron variant C/T snv 0.17
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2010 2017
dbSNP: rs1847472
rs1847472
BACH2
0.807 0.200 6 90263440 intron variant C/A snv 0.25
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2010 2017
dbSNP: rs2024092
rs2024092
SBNO2
0.827 0.120 19 1124032 intron variant G/A snv 0.24 0.26
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2008 2017
dbSNP: rs2284553
rs2284553
IFNGR2
0.776 0.240 21 33404389 intron variant A/G snv 0.69
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2012 2017
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.860 0.800 4 2005 2016
dbSNP: rs3764147
rs3764147
LACC1
0.807 0.280 13 43883789 missense variant A/G snv 0.28 0.27
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 4 2008 2017
dbSNP: rs4409764
rs4409764 		0.925 0.040 10 99524480 upstream gene variant T/A;G snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.820 1.000 4 2010 2019
dbSNP: rs4802307
rs4802307
PPP5C
0.827 0.120 19 46346549 upstream gene variant G/T snv 0.21
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 4 2012 2017
dbSNP: rs56167332
rs56167332 		0.807 0.160 5 159400761 intron variant C/A;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 4 2015 2019
dbSNP: rs10495903
rs10495903
THADA
1.000 0.040 2 43579779 intron variant C/T snv 0.13
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2010 2017
dbSNP: rs10758669
rs10758669 		0.763 0.280 9 4981602 upstream gene variant C/A;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.850 1.000 3 2008 2016
dbSNP: rs10761659
rs10761659 		0.925 0.040 10 62685804 intron variant A/G snv 0.43
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.810 1.000 3 2010 2017
dbSNP: rs11465804
rs11465804
IL23R
0.752 0.320 1 67236843 intron variant T/G snv 4.4E-02 5.4E-02
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2006 2010
dbSNP: rs12720356
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2010 2016
dbSNP: rs12942547
rs12942547
STAT3
0.807 0.200 17 42375526 intron variant A/G;T snv
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 3 2015 2017
dbSNP: rs13407913
rs13407913
ADCY3
0.827 0.120 2 24874775 intron variant A/G snv 0.54
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 3 2015 2017
dbSNP: rs1456896
rs1456896 		0.882 0.200 7 50264865 upstream gene variant C/T snv 0.67
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2008 2017
dbSNP: rs1569328
rs1569328 		0.827 0.120 14 75275048 upstream gene variant C/T snv 0.12
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.700 1.000 3 2015 2017
dbSNP: rs16967103
rs16967103 		0.827 0.120 15 38606989 intergenic variant T/C snv 0.22
CUI: C0010346
Disease: Crohn Disease
Crohn Disease 		0.800 1.000 3 2012 2017