Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2794521
rs2794521
CRP
0.742 0.480 1 159715306 upstream gene variant C/T snv 0.78
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.020 < 0.001 2 2014 2015
dbSNP: rs1049606
rs1049606
CCND2 ; CCND2-AS1
0.851 0.160 12 4273870 5 prime UTR variant C/T snv 0.58
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2010 2010
dbSNP: rs1057868
rs1057868
POR
0.763 0.320 7 75985688 missense variant C/T snv 0.31 0.27
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2019 2019
dbSNP: rs10719
rs10719
DROSHA
0.677 0.680 5 31401340 3 prime UTR variant A/G;T snv 0.69
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2016 2016
dbSNP: rs10774671
rs10774671
OAS1
0.732 0.480 12 112919388 splice acceptor variant G/A;C snv 0.67
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2016 2016
dbSNP: rs1081432
rs1081432 		1.000 0.080 2 6708412 intergenic variant T/C snv
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2014 2014
dbSNP: rs10901425
rs10901425
MMP21
0.851 0.200 10 125773956 missense variant A/G snv 0.76 0.78
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2008 2008
dbSNP: rs1130409
rs1130409
APEX1
0.555 0.720 14 20456995 missense variant T/A;C;G snv 4.0E-06; 4.0E-06; 0.42
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2018 2018
dbSNP: rs1288373809
rs1288373809
TP53
0.882 0.120 17 7673255 synonymous variant G/A snv 5.3E-06
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2009 2009
dbSNP: rs1302103336
rs1302103336
CHEK1
0.776 0.120 11 125637491 missense variant T/C snv 8.1E-06
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2013 2013
dbSNP: rs13078
rs13078
DICER1
0.827 0.280 14 95090410 3 prime UTR variant A/T snv 0.85
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2016 2016
dbSNP: rs14035
rs14035
RAN
0.742 0.320 12 130876696 3 prime UTR variant C/T snv 0.33
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2016 2016
dbSNP: rs17084733
rs17084733
KIT
1.000 0.080 4 54738774 3 prime UTR variant G/A snv 0.10
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2017 2017
dbSNP: rs17879961
rs17879961
CHEK2
0.597 0.480 22 28725099 missense variant A/C;G snv 4.1E-03
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2013 2013
dbSNP: rs1800206
rs1800206
PPARA
0.641 0.640 22 46218377 missense variant C/G snv 4.3E-02 4.2E-02
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2008 2008
dbSNP: rs1801270
rs1801270
CDKN1A
0.689 0.400 6 36684194 missense variant C/A;T snv 0.15; 4.4E-05
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2013 2013
dbSNP: rs2055979
rs2055979
IL21 ; IL21-AS1
0.827 0.320 4 122619586 intron variant C/A snv 0.23
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2019 2019
dbSNP: rs2230926
rs2230926
TNFAIP3
0.662 0.440 6 137874929 missense variant T/C;G snv 4.0E-06; 5.4E-02
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2015 2015
dbSNP: rs2237062
rs2237062
CXCL14
0.882 0.120 5 135576874 intron variant G/C snv 0.26
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2012 2012
dbSNP: rs2241883
rs2241883
FABP1
0.763 0.360 2 88124547 missense variant T/C snv 0.30 0.29
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2018 2018
dbSNP: rs28934578
rs28934578
TP53
0.605 0.600 17 7675088 missense variant C/A;T snv 4.0E-06
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.710 < 0.001 1 2017 2017
dbSNP: rs3116496
rs3116496
CD28
0.776 0.160 2 203729789 intron variant T/C snv 0.15 0.14
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2019 2019
dbSNP: rs3200401
rs3200401
MALAT1 ; MASCRNA ; TALAM1
0.742 0.320 11 65504361 splice region variant C/T snv 0.17 0.17
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2019 2019
dbSNP: rs3732379
rs3732379
CX3CR1
0.637 0.680 3 39265765 missense variant C/T snv 0.22 0.22
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2005 2005
dbSNP: rs3742330
rs3742330
DICER1
0.662 0.640 14 95087025 3 prime UTR variant A/G snv 8.7E-02
CUI: C2239176
Disease: Liver carcinoma
Liver carcinoma 		0.010 < 0.001 1 2016 2016