Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1233347077
rs1233347077
APOE
0.851 0.160 19 44905894 missense variant G/C snv 7.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.020 < 0.001 2 2010 2011
dbSNP: rs34778348
rs34778348
LRRK2 ; LOC105369736
0.742 0.120 12 40363526 missense variant G/A snv 1.7E-03 5.8E-04
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.020 < 0.001 2 2009 2010
dbSNP: rs953038635
rs953038635
SOD2
0.590 0.800 6 159692720 missense variant G/A;T snv 8.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.020 < 0.001 2 2005 2016
dbSNP: rs10046
rs10046
CYP19A1 ; MIR4713HG
0.708 0.400 15 51210789 3 prime UTR variant G/A snv 0.45 0.43
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2019 2019
dbSNP: rs104893751
rs104893751
OGG1
0.882 0.240 3 9750423 missense variant G/A;C snv 2.2E-03; 4.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2009 2009
dbSNP: rs10997691
rs10997691
CTNNA3
1.000 0.080 10 67521827 intron variant A/C snv 0.16 0.13
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2016 2016
dbSNP: rs11190305
rs11190305
DNMBP
1.000 0.080 10 99880120 missense variant A/C;G snv 0.34; 8.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2015 2015
dbSNP: rs1138272
rs1138272
GSTP1
0.611 0.600 11 67586108 missense variant C/T snv 5.9E-02 5.5E-02
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2004 2004
dbSNP: rs1143704
rs1143704
CYP19A1 ; MIR4713HG
1.000 0.080 15 51218505 missense variant T/A snv 0.45 0.42
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2019 2019
dbSNP: rs11542041
rs11542041
APOE
0.677 0.480 19 44908690 missense variant C/A;T snv 2.1E-05
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2009 2009
dbSNP: rs11887120
rs11887120
DNMT3A
0.882 0.080 2 25262866 intron variant C/T snv 0.45
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2016 2016
dbSNP: rs142444896
rs142444896
CHCHD2
0.807 0.120 7 56106409 missense variant G/A snv 9.3E-03 7.5E-03
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2018 2018
dbSNP: rs149119842
rs149119842
CHCHD2
0.882 0.120 7 56104288 missense variant T/C snv 2.4E-05 2.8E-05
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2018 2018
dbSNP: rs1544210
rs1544210 		0.882 0.240 10 92728044 regulatory region variant G/A snv 0.39
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2015 2015
dbSNP: rs17746510
rs17746510
RAPGEF4
0.882 0.080 2 173019562 intron variant T/C;G snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2016 2016
dbSNP: rs1800977
rs1800977
ABCA1 ; LOC105376196
0.851 0.240 9 104928169 intron variant G/A;C snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2016 2016
dbSNP: rs200396597
rs200396597
APP
1.000 0.080 21 25881743 missense variant C/T snv 7.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2018 2018
dbSNP: rs2066713
rs2066713
SLC6A4
0.807 0.200 17 30224647 intron variant G/A snv 0.34
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2020 2020
dbSNP: rs2066718
rs2066718
ABCA1
0.882 0.120 9 104826974 missense variant C/G;T snv 4.3E-04; 5.4E-02
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2016 2016
dbSNP: rs2228479
rs2228479
MC1R
0.763 0.280 16 89919532 missense variant G/A;C snv 7.8E-02; 4.0E-06
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2017 2017
dbSNP: rs223330
rs223330
CISD2
0.851 0.160 4 102872502 intron variant T/A;C snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2015 2015
dbSNP: rs2234886
rs2234886
ABCA1
1.000 0.080 9 104800523 missense variant T/C snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2003 2003
dbSNP: rs2240158
rs2240158
GRIN3B
0.925 0.120 19 1005231 missense variant C/T snv 0.36 0.41
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2009 2009
dbSNP: rs2250889
rs2250889
MMP9 ; SLC12A5-AS1
0.667 0.520 20 46013767 missense variant G/C;T snv 0.88; 1.6E-05
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2005 2005
dbSNP: rs2274756
rs2274756
MMP9 ; SLC12A5-AS1
0.851 0.200 20 46014472 missense variant G/A;C snv
CUI: C0002395
Disease: Alzheimer's Disease
Alzheimer's Disease 		0.010 < 0.001 1 2005 2005