Source: ALL

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs1448674651
rs1448674651
TYMS ; ENOSF1
0.667 0.560 18 671384 missense variant G/A;C snv 4.0E-06
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2004 2004
dbSNP: rs1477353313
rs1477353313
ACR
0.925 0.120 22 50744085 missense variant T/G snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2004 2004
dbSNP: rs1863800
rs1863800 		1.000 0.120 2 203837937 intergenic variant C/T snv 0.39
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2004 2004
dbSNP: rs5743708
rs5743708
TLR2
0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2004 2004
dbSNP: rs31517
rs31517
LECT2 ; FBXL21P
1.000 0.120 5 135951340 missense variant T/C snv 0.64 0.62
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 < 0.001 1 2005 2005
dbSNP: rs3743930
rs3743930
MEFV
0.611 0.720 16 3254626 missense variant C/G;T snv 7.1E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2005 2005
dbSNP: rs751650405
rs751650405
NHS
1.000 0.120 X 17719360 missense variant C/G;T snv 3.5E-05 2.9E-05
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2005 2005
dbSNP: rs237025
rs237025
TAB2 ; SUMO4
0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.030 0.333 3 2005 2006
dbSNP: rs1050501
rs1050501
FCGR2B
0.732 0.440 1 161674008 missense variant T/C snv 0.16 0.19
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.020 1.000 2 2002 2006
dbSNP: rs104895218
rs104895218
TNFRSF1A
0.827 0.240 12 6334099 missense variant C/T snv
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2006 2006
dbSNP: rs11264799
rs11264799
FCRL3
0.851 0.240 1 157700967 upstream gene variant C/T snv 0.28
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2006 2006
dbSNP: rs745826707
rs745826707
RBM45
0.851 0.200 2 178112712 missense variant G/A;T snv 8.0E-06; 4.0E-06
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2006 2006
dbSNP: rs945635
rs945635
FCRL3
0.882 0.200 1 157700500 5 prime UTR variant C/A;G snv 5.6E-05; 0.45
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2006 2006
dbSNP: rs4149584
rs4149584
TNFRSF1A
0.683 0.440 12 6333477 missense variant C/G;T snv 4.0E-06; 1.3E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.020 0.500 2 2002 2007
dbSNP: rs1075496
rs1075496
NRM
0.882 0.160 6 30690462 intron variant C/A snv 0.47
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1133104
rs1133104
CLEC4A
1.000 0.120 12 8138526 3 prime UTR variant T/G snv 0.25
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 < 0.001 1 2007 2007
dbSNP: rs1217413
rs1217413
PTPN22 ; AP4B1-AS1
1.000 0.120 1 113815128 intron variant G/A snv 0.82
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1265048
rs1265048
C6orf15 ; PSORS1C1
1.000 0.120 6 31113632 upstream gene variant T/C snv 0.35
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1457092
rs1457092
MYO9B
0.790 0.320 19 17193427 intron variant C/A snv 0.44
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2007 2007
dbSNP: rs150240657
rs150240657
AGBL2
0.925 0.120 11 47682026 missense variant G/A snv 8.7E-05 3.6E-04
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2007 2007
dbSNP: rs1569723
rs1569723 		0.851 0.280 20 46113425 upstream gene variant C/A snv 0.80
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1611133
rs1611133 		1.000 0.120 6 29841605 intergenic variant C/T snv 0.19
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1632948
rs1632948
HLA-G
1.000 0.120 6 29826272 upstream gene variant T/C snv 0.54
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.700 1.000 1 2007 2007
dbSNP: rs1799930
rs1799930
NAT2
0.716 0.400 8 18400593 missense variant G/A snv 0.27 0.27
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2007 2007
dbSNP: rs1799931
rs1799931
NAT2
0.742 0.320 8 18400860 missense variant G/A snv 5.8E-02 3.9E-02
CUI: C0003873
Disease: Rheumatoid Arthritis
Rheumatoid Arthritis 		0.010 1.000 1 2007 2007