Source: GWASCAT

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs9300039
rs9300039 		0.851 0.160 11 41893816 intergenic variant C/A snv 9.8E-02
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.840 1.000 1 2007 2011
dbSNP: rs3802177
rs3802177
SLC30A8 ; LOC105375716
1.000 0.080 8 117172786 3 prime UTR variant G/A snv 0.24
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.820 1.000 8 2008 2019
dbSNP: rs2237892
rs2237892
KCNQ1
0.790 0.320 11 2818521 intron variant C/T snv 9.2E-02
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.900 1.000 6 2008 2019
dbSNP: rs2237897
rs2237897
KCNQ1
0.882 0.200 11 2837316 intron variant C/T snv 8.1E-02
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.880 1.000 3 2008 2019
dbSNP: rs4607103
rs4607103
ADAMTS9-AS2
0.882 0.120 3 64726228 intron variant C/T snv 0.28
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.840 1.000 3 2008 2019
dbSNP: rs1260326
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.770 1.000 2 2008 2019
dbSNP: rs2237895
rs2237895
KCNQ1
0.790 0.240 11 2835964 intron variant A/C;T snv
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.900 0.889 2 2008 2019
dbSNP: rs7578597
rs7578597
THADA
0.807 0.240 2 43505684 missense variant T/C snv 9.9E-02 0.14
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.840 1.000 2 2008 2017
dbSNP: rs864745
rs864745
JAZF1
0.763 0.320 7 28140937 intron variant T/C snv 0.41
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.890 0.929 2 2008 2017
dbSNP: rs1153188
rs1153188 		0.925 0.120 12 54705212 intergenic variant T/A snv 0.76
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.810 1.000 1 2008 2012
dbSNP: rs12779790
rs12779790 		0.882 0.120 10 12286011 intergenic variant A/G snv 0.17
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.850 1.000 1 2008 2015
dbSNP: rs17036101
rs17036101 		0.925 0.120 3 12236345 regulatory region variant G/A;T snv
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.800 1.000 1 2008 2011
dbSNP: rs1799884
rs1799884
GCK
1.000 0.080 7 44189469 intron variant C/T snv 0.17
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.830 0.750 1 2008 2013
dbSNP: rs2476601
rs2476601
PTPN22 ; AP4B1-AS1
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.730 1.000 1 2008 2018
dbSNP: rs4712524
rs4712524
CDKAL1
0.925 0.120 6 20657634 intron variant A/G snv 0.40
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.820 1.000 1 2008 2019
dbSNP: rs6769511
rs6769511
IGF2BP2
0.925 0.120 3 185812502 intron variant T/C snv 0.46
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.810 1.000 1 2008 2012
dbSNP: rs7020996
rs7020996 		0.925 0.120 9 22129580 downstream gene variant C/A;T snv
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.810 1.000 1 2008 2011
dbSNP: rs7961581
rs7961581
TSPAN8
0.827 0.200 12 71269322 intron variant C/T snv 0.75
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.840 1.000 1 2008 2017
dbSNP: rs10830963
rs10830963
MTNR1B
0.776 0.400 11 92975544 intron variant C/G snv 0.22
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.900 0.939 6 2009 2020
dbSNP: rs12970134
rs12970134 		0.790 0.280 18 60217517 intergenic variant G/A snv 0.21
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.840 1.000 4 2009 2018
dbSNP: rs1421085
rs1421085
FTO
0.752 0.280 16 53767042 intron variant T/C snv 0.31
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.730 1.000 3 2009 2019
dbSNP: rs2383208
rs2383208 		0.882 0.120 9 22132077 downstream gene variant A/G;T snv 0.18
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.810 1.000 3 2009 2016
dbSNP: rs4430796
rs4430796
HNF1B
0.790 0.280 17 37738049 intron variant A/G snv 0.52
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.870 1.000 3 2009 2019
dbSNP: rs2283228
rs2283228
KCNQ1
1.000 0.080 11 2828300 intron variant A/C snv 0.10
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.760 1.000 2 2009 2017
dbSNP: rs4689388
rs4689388
WFS1
0.882 0.360 4 6268329 upstream gene variant G/A snv 0.64
CUI: C0011860
Disease: Diabetes Mellitus, Non-Insulin-Dependent
Diabetes Mellitus, Non-Insulin-Dependent 		0.820 1.000 2 2009 2017