Source: GWASDB

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs3803662
rs3803662
CASC16
0.662 0.440 16 52552429 non coding transcript exon variant A/G snv 0.63
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 0.950 8 2007 2019
dbSNP: rs13387042
rs13387042
LOC101928278 ; LOC105373874
0.732 0.280 2 217041109 intergenic variant A/G snv 0.44
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 1.000 5 2007 2016
dbSNP: rs4973768
rs4973768
SLC4A7
0.807 0.120 3 27374522 3 prime UTR variant C/T snv 0.44
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 1.000 4 2009 2019
dbSNP: rs1219648
rs1219648
FGFR2
0.716 0.320 10 121586676 intron variant A/G;T snv
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 1.000 3 2007 2018
dbSNP: rs2046210
rs2046210 		0.708 0.280 6 151627231 intergenic variant G/A snv 0.41
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 1.000 3 2009 2019
dbSNP: rs889312
rs889312 		0.732 0.360 5 56736057 regulatory region variant C/A snv 0.69
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 0.952 3 2007 2017
dbSNP: rs13281615
rs13281615
POU5F1B ; CASC8 ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 0.850 2 2007 2016
dbSNP: rs3817198
rs3817198
LSP1
0.790 0.280 11 1887776 intron variant T/C snv 0.26
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 0.929 2 2007 2017
dbSNP: rs10941679
rs10941679 		0.763 0.120 5 44706396 intergenic variant A/G snv 0.25
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 1.000 1 2008 2016
dbSNP: rs2981582
rs2981582
FGFR2
0.695 0.360 10 121592803 intron variant A/G snv 0.58
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.800 0.971 1 2007 2019
dbSNP: rs2981578
rs2981578
FGFR2
0.925 0.080 10 121580797 intron variant C/A;T snv
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.790 0.909 2 2007 2018
dbSNP: rs4415084
rs4415084 		0.827 0.080 5 44662413 upstream gene variant C/T snv 0.49
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.790 1.000 1 2008 2018
dbSNP: rs10995190
rs10995190
ZNF365
0.882 0.080 10 62518923 intron variant G/A snv 0.16
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 1.000 3 2010 2017
dbSNP: rs11249433
rs11249433
EMBP1
0.827 0.160 1 121538815 intron variant A/C;G snv
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 0.778 2 2009 2016
dbSNP: rs2420946
rs2420946
FGFR2
0.851 0.160 10 121591810 intron variant T/C snv 0.56
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 1.000 2 2007 2017
dbSNP: rs4784227
rs4784227
CASC16
0.807 0.160 16 52565276 intron variant C/T snv 0.20
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 1.000 2 2010 2020
dbSNP: rs6504950
rs6504950
STXBP4
0.807 0.120 17 54979110 intron variant G/A snv 0.29
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 0.889 2 2009 2017
dbSNP: rs999737
rs999737
RAD51B
0.776 0.200 14 68567965 intron variant C/T snv 0.16
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 0.889 2 2009 2016
dbSNP: rs12443621
rs12443621
TOX3
0.807 0.120 16 52514125 intron variant A/G snv 0.48
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 0.875 1 2007 2016
dbSNP: rs8051542
rs8051542
TOX3
0.925 0.080 16 52500255 intron variant T/C snv 0.61
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.770 0.875 1 2007 2019
dbSNP: rs10069690
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.750 1.000 3 2011 2019
dbSNP: rs10771399
rs10771399 		0.827 0.080 12 28002147 intergenic variant A/G snv 8.9E-02
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.750 1.000 2 2012 2016
dbSNP: rs8170
rs8170
BABAM1 ; USHBP1
0.724 0.160 19 17278895 synonymous variant G/A snv 0.15 0.18
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.750 0.833 2 2010 2014
dbSNP: rs2981579
rs2981579
FGFR2
0.776 0.280 10 121577821 intron variant A/G snv 0.53
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.740 1.000 3 2009 2017
dbSNP: rs1011970
rs1011970
CDKN2B-AS1
0.677 0.320 9 22062135 intron variant G/T snv 0.23
CUI: C0006142
Disease: Malignant neoplasm of breast
Malignant neoplasm of breast 		0.740 1.000 2 2010 2015