Source: BEFREE

Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Disease Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs864622007
rs864622007
AR
0.882 0.200 X 67711621 missense variant T/A snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.830 1.000 3 2002 2010
dbSNP: rs138213197
rs138213197
HOXB13
0.701 0.240 17 48728343 missense variant C/T snv 1.8E-03 1.6E-03
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.935 31 2012 2019
dbSNP: rs1447295
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.917 28 2007 2018
dbSNP: rs10993994
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 26 2008 2019
dbSNP: rs6983267
rs6983267
POU5F1B ; CASC8 ; PCAT1 ; CCAT2
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.857 24 2007 2017
dbSNP: rs16901979
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.950 17 2007 2018
dbSNP: rs4430796
rs4430796
HNF1B
0.790 0.280 17 37738049 intron variant A/G snv 0.52
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 16 2008 2018
dbSNP: rs137852578
rs137852578
AR
0.827 0.080 X 67723710 missense variant A/G snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 1.000 14 2002 2015
dbSNP: rs2735839
rs2735839 		0.827 0.160 19 50861367 upstream gene variant A/C;G snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.800 0.923 12 2008 2019
dbSNP: rs351855
rs351855
FGFR4
0.597 0.560 5 177093242 missense variant G/A snv 0.33 0.26
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.780 0.900 8 2005 2017
dbSNP: rs6983561
rs6983561
PCAT1 ; CASC19
0.925 0.080 8 127094635 intron variant A/C snv 0.17
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.780 1.000 8 2008 2017
dbSNP: rs1859962
rs1859962
CASC17
0.882 0.160 17 71112612 intron variant G/T snv 0.56
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.770 0.900 7 2008 2016
dbSNP: rs339331
rs339331
RFX6
0.882 0.080 6 116888889 intron variant T/C snv 0.28
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.760 0.857 6 2010 2016
dbSNP: rs17632542
rs17632542
KLK3
0.925 0.080 19 50858501 missense variant T/C snv 5.5E-02 4.9E-02
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.750 0.667 5 2011 2015
dbSNP: rs12653946
rs12653946
CTD-2194D22.4
0.882 0.080 5 1895715 intron variant C/T snv 0.43
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2010 2013
dbSNP: rs137852593
rs137852593
AR
0.827 0.160 X 67717484 missense variant G/A;C;T snv 2.2E-05; 1.1E-05; 9.1E-04
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2000 2004
dbSNP: rs4242382
rs4242382 		0.763 0.240 8 127505328 intergenic variant A/G;T snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2008 2015
dbSNP: rs7501939
rs7501939
HNF1B
0.776 0.280 17 37741165 intron variant C/T snv 0.41
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.740 1.000 4 2008 2018
dbSNP: rs103294
rs103294 		0.827 0.200 19 54293995 downstream gene variant T/C snv 0.82
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 1.000 3 2012 2014
dbSNP: rs16901966
rs16901966
PCAT1 ; CASC19
0.925 0.080 8 127098007 intron variant A/G snv 0.13
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 1.000 3 2008 2016
dbSNP: rs5945572
rs5945572 		0.882 0.160 X 51486831 downstream gene variant A/G snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 1.000 3 2008 2010
dbSNP: rs620861
rs620861
POU5F1B ; CASC8 ; PCAT1 ; CASC21
0.925 0.080 8 127323428 intron variant G/A snv 0.36
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.730 0.750 3 2008 2017
dbSNP: rs1058205
rs1058205
KLK3
0.925 0.080 19 50860142 3 prime UTR variant C/T snv 0.75 0.74
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 2 2008 2018
dbSNP: rs10896449
rs10896449 		0.827 0.200 11 69227200 intergenic variant A/G snv 0.53
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 1.000 2 2008 2013
dbSNP: rs11568818
rs11568818
MMP7
0.763 0.280 11 102530930 upstream gene variant T/A;C snv
CUI: C0376358
Disease: Malignant neoplasm of prostate
Malignant neoplasm of prostate 		0.720 0.667 2 2013 2018