Source: BEFREE

Variant Gene Disease Risk Allele Score vda Association Type Original DB Sentence supporting the association PMID PMID Year
dbSNP: rs1800629
rs1800629
TNF
CUI: C0042769
Disease: Virus Diseases
Virus Diseases
0.010 GeneticVariation BEFREE Inconsistency of reported associations between the tumor necrosis factor-alpha-308 (TNFα-308) polymorphism (rs1800629) and dengue virus infection prompted a meta-analysis, to obtain more precise estimates. 28495402

2017

dbSNP: rs1800629
rs1800629
TNF
Aspirin exacerbated respiratory disease
0.010 GeneticVariation BEFREE The GA genotype of rs1800629 is associated with genetic susceptibility to AERD, but it does not correlate to protein serum levels. 29172674

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0333519
Disease: Caries (morphologic abnormality)
Caries (morphologic abnormality)
0.010 GeneticVariation BEFREE The ENAM rs3796703 CT genotype increased caries susceptibility by 60.9% compared to the CC genotype (β=0.746, OR=1.609), and the TNF-α rs1800629 AG genotype reduced ca</span>ries susceptibility by 47.4% compared to the GG genotype (β=-0.642, OR=0.526). 28395167

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0035288
Disease: Reticuloendotheliosis, X-linked
Reticuloendotheliosis, X-linked
0.010 GeneticVariation BEFREE In the present study, we investigated the role of a promoter region polymorphism rs1800629 (-308G>A) in the inflammatory pathway component TNF-α and its effects on the expression of TNF-α and downstream molecules tumor necrosis factor receptor 1 and 2 (TNFR1 and TNFR2), v-rel avian reticuloendotheliosis viral oncogene homolog A (RELA), and interleukin 6 (IL-6) in KC development. 28702675

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0025202
Disease: melanoma
melanoma
0.010 GeneticVariation BEFREE We performed a meta-analysis to assess the relationship between single nucleotide polymorphisms in the TNF-α promoter region (rs1800629 and rs361525) and susceptibility to squamous cell carcinoma (SCC), basal cell carcinoma (BCC) and melanoma. 28881857

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0007137
Disease: Squamous cell carcinoma
Squamous cell carcinoma
0.010 GeneticVariation BEFREE These data indicate that the AA genotype of <i>TNF-α</i> rs1800629, but not rs361525, is associated with an increased risk of SCC, suggesting it could potentially serve as a prognostic marker for predicting SCC risk. 28881857

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0011334
Disease: Dental caries
Dental caries
0.010 GeneticVariation BEFREE The ENAM rs3796703 CT genotype increased caries susceptibility by 60.9% compared to the CC genotype (β=0.746, OR=1.609), and the TNF-α rs1800629 AG genotype reduced ca</span>ries susceptibility by 47.4% compared to the GG genotype (β=-0.642, OR=0.526). 28395167

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0022578
Disease: Keratoconus
Keratoconus
0.010 GeneticVariation BEFREE In the present study, we investigated the role of a promoter region polymorphism rs1800629 (-308G>A) in the inflammatory pathway component TNF-α and its effects on the expression of TNF-α and downstream molecules tumor necrosis factor receptor 1 and 2 (TNFR1 and TNFR2), v-rel avian reticuloendotheliosis viral oncogene homolog A (RELA), and interleukin 6 (IL-6) in KC development. 28702675

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0030286
Disease: Pancreatic Diseases
Pancreatic Diseases
0.010 GeneticVariation BEFREE We genotyped the selected SNPs (rs16944, rs1052536, rs1059293, rs1136410, rs1143634, rs2069762, rs2236302, rs2387632, rs3212961, rs3734299, rs3803258, rs4962081, rs7234941, rs7243091, rs12957119, and rs1800629) in 344 PNET sporadic cases and 2,721 controls in the context of the PANcreatic Disease ReseArch (PANDoRA) consortium.<b>Results:</b> After correction for multiple testing, we did not observe any statistically significant association between the SNPs and PNET risk. 28765340

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0032460
Disease: Polycystic Ovary Syndrome
Polycystic Ovary Syndrome
0.010 GeneticVariation BEFREE We thus found that both the genotypic and allelic distributions of rs4645843 were significantly different between PCOS and control groups (p = 0.03 and 0.024, respectively), whereas those of rs1800629 were similar between the groups. 28993561

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0038436
Disease: Post-Traumatic Stress Disorder
Post-Traumatic Stress Disorder
0.010 GeneticVariation BEFREE To our knowledge, this is the first time rs1800629 has been investigated in PTSD contributing to a growing body of literature that identifies the GG as a risk genotype for psychiatric disorders in Caucasian cohorts. 28160694

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0233514
Disease: Abnormal behavior
Abnormal behavior
0.010 GeneticVariation BEFREE To our knowledge, this is the first time rs1800629 has been investigated in PTSD contributing to a growing body of literature that identifies the GG as a risk genotype for psychiatric disorders in Caucasian cohorts. 28160694

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0409959
Disease: Osteoarthritis, Knee
Osteoarthritis, Knee
0.010 GeneticVariation BEFREE The objective of the present study is to investigate if there is a potential association between the single-nucleotide polymorphisms (SNPs) of the tumor necrosis factor alpha gene (TNF-α -308G/A, rs1800629) and the susceptibility to and severity of early-onset knee osteoarthritis in the Egyptian female population. 28695434

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C1135196
Disease: Heart Failure, Diastolic
Heart Failure, Diastolic
0.010 GeneticVariation BEFREE The study aimed to assess the clinical significance of selected single nucleotide polymorphisms (SNPs) in patients with diastolic heart failure (HF): inflammation [-174 G/C Interleukin -6 (IL-6) rs1800795, tumor necrosis factor (TNF)-608 G/A rs1800629], fibrosis [Arg25Pro transforming growth factor β (TGF β) rs1800471], endothelial function [-786 T/C nitric oxide synthase (NOS) rs2070744], glucose and lipid metabolism [Pro12Ala peroxisome proliferator activated receptor (PPAR)γ rs1801282], and vitamin D metabolism [cytochrome P450 27B1 (CYP27B1) C-1260A].110 patients with HF with preserved and mid-range ejection fraction (HFpEF and HFmrEF) were recruited. 28827564

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0524909
Disease: Hepatitis B, Chronic
Hepatitis B, Chronic
0.010 GeneticVariation BEFREE To test this hypothesis, we investigated the role of TNF-α polymorphism [-863C/A (rs1800630), -308G/A (rs1800629), -376G/A (rs1800750), -857C/T (rs1799724) and +489G/A (rs1800610)] in the susceptibility to chronic hepatitis B (CHB) infection. 29054398

2017

dbSNP: rs1800629
rs1800629
TNF
CUI: C0027051
Disease: Myocardial Infarction
Myocardial Infarction
0.010 GeneticVariation BEFREE Association between TNF-α rs1800629 polymorphism and the risk of myocardial infarction: A meta-analysis. 27706628

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0338656
Disease: Impaired cognition
Impaired cognition
0.010 GeneticVariation BEFREE Impact of TNF-α (rs1800629) and IL-6 (rs1800795) Polymorphisms on Cognitive Impairment in Asian Breast Cancer Patients. 27701469

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0343466
Disease: Type 2 lepra reaction
Type 2 lepra reaction
0.010 GeneticVariation BEFREE We genotyped rs1800629 in 326 leprosy cases from Bahia State, Brazil, including 72 paucibacillary (PB) and 47 multibacillary (MB) without reactions, and 69 reversal reaction (RR) and 78 erythema nodosum leprosum (ENL) with reactions. 26829382

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0011847
Disease: Diabetes
Diabetes
0.010 GeneticVariation BEFREE An association between the A allele of rs1800629 and type of diabetes was found. 26821796

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0279628
Disease: Adenocarcinoma Of Esophagus
Adenocarcinoma Of Esophagus
0.010 GeneticVariation BEFREE Our results suggest that TNF-α-308 G>A (rs1800629) is not significantly associated with a risk of esophageal squamous cell carcinoma and esophageal adenocarcinoma. 27821804

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0343467
Disease: Erythema nodosum leprosum
Erythema nodosum leprosum
0.010 GeneticVariation BEFREE We genotyped rs1800629 in 326 leprosy cases from Bahia State, Brazil, including 72 paucibacillary (PB) and 47 multibacillary (MB) without reactions, and 69 reversal reaction (RR) and 78 erythema nodosum leprosum (ENL) with reactions. 26829382

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0011849
Disease: Diabetes Mellitus
Diabetes Mellitus
0.010 GeneticVariation BEFREE An association between the A allele of rs1800629 and type of diabetes was found. 26821796

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C0030807
Disease: Pemphigus
Pemphigus
0.010 GeneticVariation BEFREE Tumor necrosis factor (TNF)-α -308G/A (rs1800629) polymorphism distribution in North India and its association with pemphigus: Case-control study and meta-analysis. 26761187

2016

dbSNP: rs1800629
rs1800629
TNF
Visually threatening diabetic retinopathy
0.010 GeneticVariation BEFREE After adjustment for age, sex, diabetes duration, HbA1c, hypertension and nephropathy, no significant association was found between rs1800629 or rs361525 and sight-threatening diabetic retinopathy. 26821796

2016

dbSNP: rs1800629
rs1800629
TNF
CUI: C2215101
Disease: Acute cerebral ischemia
Acute cerebral ischemia
0.010 GeneticVariation BEFREE The final multivariate model for acute cerebral ischemia risk included high white blood cell count and reticulocyte count, acute chest syndrome rate, and the single nucleotide polymorphisms (SNPs) TEK rs489347 and TNF-α rs1800629. 27520094

2016