Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 100188864
Gene Symbol: IH
IH
0.020 Biomarker group BEFREE Hemihypertrophy is a condition that has been described in association with a variety of other malformations and diseases; quite often these have had a renal origin. 1012806 1976
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.010 Biomarker group BEFREE Bcl-2 is crucial for normal development in the kidney, with a deficiency in Bcl-2 producing such malformation that renal failure and death result. 10361261 1999
Entrez Id: 8830
Gene Symbol: PTLAH
PTLAH
0.010 Biomarker group BEFREE PTLAH can occur either as an isolated defect or in association with other malformations, and it characteristically occurs in the nail-patella syndrome and in some chromosome imbalances. 10417287 1999
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.100 GeneticVariation group BEFREE PAX2 mutations cause renal-coloboma syndrome (RCS), a rare multi-system developmental abnormality involving optic nerve colobomas and renal abnormalities. 10587573 2000
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.100 Biomarker group BEFREE Diamond-Blackfan anemia (DBA) is a rare congenital pure red cell hypoplasia characterized by a selective defect of erythropoiesis with a normochromic macrocytic anemia and reticulocytopenia often accompanied by various congenital anomalies. 10753603 2000
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.060 Biomarker group BEFREE Synpolydactyly (SPD) is a rare malformation of the distal limbs known to be caused by mutations in HOXD13. 10951517 2000
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.100 Biomarker group BEFREE Diamond-Blackfan anemia (DBA) is a congenital disease characterized by defective erythroid progenitor maturation and physical malformations. 11112378 2000
Entrez Id: 50964
Gene Symbol: SOST
SOST
0.020 Biomarker group BEFREE Sclerosteosis is clinically and radiologically very similar to van Buchem disease, mainly differentiated by hand malformations and a large stature in sclerosteosis patients. 11181578 2001
Entrez Id: 5080
Gene Symbol: PAX6
PAX6
0.100 Biomarker group BEFREE PAX6 haploinsufficiency causes cerebral malformation and olfactory dysfunction in humans. 11431688 2001
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.100 Biomarker group BEFREE Diamond-Blackfan anemia (DBA) is a heterogeneous genetic disorder characterized by red cell aplasia and congenital anomalies. 11563775 2001
Entrez Id: 170474
Gene Symbol: HFM
HFM
0.040 Biomarker group BEFREE Hemifacial microsomia: progress in understanding the genetic basis of a complex malformation syndrome. 11810276 2001
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.100 Biomarker group BEFREE CHARGE association is a non-random occurrence of congenital malformations including coloboma, heart disease, choanal atresia, retarded growth and/or retarded development, genital hypoplasia, ear anomalies and/or deafness. 11940088 2002
Entrez Id: 57167
Gene Symbol: SALL4
SALL4
0.060 Biomarker group BEFREE SALL4 represents the first identified Duane syndrome gene and the second malformation syndrome resulting from mutations in SAL genes and likely plays a critical role in abducens motoneuron development. 12395297 2002
Entrez Id: 50964
Gene Symbol: SOST
SOST
0.020 Biomarker group BEFREE Sclerosteosis is a unique autosomal recessive condition in which skeletal overgrowth is associated with syndactyly and digital malformation. 1259284 1976
Entrez Id: 114548
Gene Symbol: NLRP3
NLRP3
0.010 Biomarker group BEFREE MWS is a multiple congenital anomaly syndrome, first clinically delineated by Mowat et al in 1998.Over 45 cases have now been reported. 12746390 2003
Entrez Id: 2296
Gene Symbol: FOXC1
FOXC1
0.100 Biomarker group BEFREE FOXC1 was amplified from a proband with Axenfeld-Rieger malformations and the proband's mother. 14578375 2003
Entrez Id: 4089
Gene Symbol: SMAD4
SMAD4
0.010 AlteredExpression group BEFREE Smad4 is expressed in the mammary gland throughout development; however, its inactivation did not cause abnormal development of the gland during the first three pregnancies. 14597578 2003
Entrez Id: 947
Gene Symbol: CD34
CD34
0.020 Biomarker group BEFREE CD34-immunoreactive balloon cells in cortical malformations. 15221338 2004
Entrez Id: 9289
Gene Symbol: ADGRG1
ADGRG1
0.050 Biomarker group BEFREE GPR56 (also known as TM7XN1) is a newly discovered orphan G-protein-coupled receptor (GPCR) of the secretin family that has a role in the development of neural progenitor cells and has been linked to developmental malformations of the human brain. 15674329 2005
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.100 GeneticVariation group BEFREE LIS1 mutations cause a more severe malformation posteriorly. 15816977 2005
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.100 GeneticVariation group BEFREE LIS1 mutations cause a more severe malformation posteriorly. 15921228 2005
Entrez Id: 5660
Gene Symbol: PSAP
PSAP
0.010 AlteredExpression group BEFREE PSAP is a neurotrophic molecule; its deficiency or inactivation has proved to be lethal in man and mice, and in mice, it leads to abnormal development and atrophy of the prostate gland, despite normal testosterone levels. 16080200 2005
Entrez Id: 5075
Gene Symbol: PAX1
PAX1
0.020 Biomarker group BEFREE Pax1/E2a double-mutant mice develop non-lethal neural tube defects that resemble human malformations. 16315099 2005
Entrez Id: 3239
Gene Symbol: HOXD13
HOXD13
0.060 GeneticVariation group BEFREE Synpolydactyly (SPD) is an autosomal dominant malformation of the distal limbs caused by mutations in the homeobox gene HOXD13 located on chromosome 2q31. 16497573 2006
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.090 GeneticVariation group BEFREE SOX2 mutations are known to cause severe bilateral eye malformations but this is the first report implicating loss of function mutations in this transcription factor in oesophageal malformations. 16543359 2006