Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 2138
Gene Symbol: EYA1
EYA1
0.350 AlteredExpression group BEFREE Four eya1 mRNAs encoding proteins correlated with congenital anomalies in human were injected into early stage embryos. 19951260 2010
Entrez Id: 2138
Gene Symbol: EYA1
EYA1
0.350 Biomarker group BEFREE Previous studies indicated that transcriptional complex SIX1/EYA1 may contribute to SHF development, and SIX1/EYA1 knockout mice exhibited a series of conotruncal malformations. 29043394 2018
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 GeneticVariation group BEFREE Don't miss patients with atypical FMR1 mutations: dysmorphism and clinical features in a boy with a partially methylated FMR1 full mutation. 25027833 2014
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE To aid in elucidation of the underlying developmental defect in SCDO1, we have generated a mouse model by targeted deletion of the Dll3 gene (Dunwoodie et al., 2002). 12141422 2002
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE Targeted deletion of Dll3 in the mouse causes a developmental defect in somite segmentation, and consequently vertebral formation is severely disrupted, closely resembling human SCD. 21147753 2011
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 Biomarker group BEFREE Using temporally and spatially controlled genetic manipulations, this study provides the first <i>in vivo</i> report that autonomous FMRP regulates multiple stages of dendritic development, and that selective reduction of postsynaptic FMRP leads to abnormal development of excitatory presynaptic terminals and compromised neurotransmission. 29950504 2018
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.330 GeneticVariation group BEFREE We analysed 3D facial photographs of 51 males and 15 females with full FMR1 mutations and 9 females with a premutation using dense-surface modelling techniques and a new technique that forms a directed graph with normalized face shapes as nodes and edges linking those with closest dysmorphism. 23211703 2013
Entrez Id: 10683
Gene Symbol: DLL3
DLL3
0.330 GeneticVariation group BEFREE We sequenced the DLL3 gene in 50 patients with congenital vertebral malformations. 17041936 2006
Entrez Id: 2348
Gene Symbol: FOLR1
FOLR1
0.310 AlteredExpression group BEFREE The objective of this study was to compare the expression of Folate Receptor-α (FR-α), Reduced Folate Carrier (RFC), and Proton Coupled Folate Transporter (PCFT) in placentas from pregnancies complicated with birth defects (BD) and controls. 30063111 2018
Entrez Id: 6928
Gene Symbol: HNF1B
HNF1B
0.100 GeneticVariation group BEFREE Mutations in the HNF1B (MODY 5) is associated with pancreatic agenesis, renal abnormalities, genital tract malformations, and liver dysfunction. 25581748 2015
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.100 Biomarker group BEFREE In cases of d-TGA, the FINE method has a high success rate in generating 3 specific abnormal cardiac views and therefore can be performed to screen for this congenital defect. 31675129 2020
Entrez Id: 7846
Gene Symbol: TUBA1A
TUBA1A
0.100 GeneticVariation group BEFREE TUBA1A mutation can cause a hydranencephaly-like severe form of cortical dysgenesis. 26493046 2015
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.100 Biomarker group BEFREE This rather specific recurrent pattern of congenital anomalies associated with overlapping duplications of the genomic region containing CHD7 suggests that the phenotype in these two patients may be the result of abnormal CHD7 dosage. 19772954 2010
Entrez Id: 6928
Gene Symbol: HNF1B
HNF1B
0.100 Biomarker group BEFREE Hepatocyte nuclear factor 1beta (HNF1beta) abnormalities have been recognized to cause congenital anomalies of the kidney and urinary tract (CAKUT), predominantly affecting bilateral renal malformations. 20155289 2010
Entrez Id: 5048
Gene Symbol: PAFAH1B1
PAFAH1B1
0.100 GeneticVariation group BEFREE LIS1 mutations cause a more severe malformation posteriorly. 15816977 2005
Entrez Id: 2263
Gene Symbol: FGFR2
FGFR2
0.100 GeneticVariation group BEFREE More recently it has been recognized that FGFR2 may have a role in the development of the anterior chamber of the eye following the finding of a specific FGFR2 mutation (p.Ser351Cys, c.1231 C --> G) with anterior chamber dysgenesis. 16158432 2005
Entrez Id: 4807
Gene Symbol: NHLH1
NHLH1
0.100 Biomarker group BEFREE Non-syndromic cleft lip/palate (NSCL/P) is a common congenital defect in Mexico. 24460828 2014
Entrez Id: 4807
Gene Symbol: NHLH1
NHLH1
0.100 Biomarker group BEFREE Non-syndromic cleft lip with or without cleft palate (NSCL/P) is one of the most common of all congenital malformations and has a multifactorial etiology. 22984993 2012
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 GeneticVariation group BEFREE We genotyped 771 CVM cases, of whom 595 had the outflow tract malformation Tetralogy of Fallot (TOF), and carried out TDT and case-control analyses using haplotype-tagging SNPs in VEGF. 19308252 2009
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.100 Biomarker group BEFREE 22q11 deletion syndrome (22qDS), also known as DiGeorge or velocardiofacial syndrome (DGS/VCFS), is a relatively common genetic anomaly that results in malformations of the heart, face and limbs. 12175881 2002
Entrez Id: 6899
Gene Symbol: TBX1
TBX1
0.100 Biomarker group BEFREE Velo-cardio-facial syndrome/DiGeorge syndrome (VCFS/DGS) is a congenital anomaly disorder associated with hemizygous 22q11 deletions. 11709542 2001
Entrez Id: 55636
Gene Symbol: CHD7
CHD7
0.100 GeneticVariation group BEFREE CHD7 variants are a well-established cause of CHARGE syndrome, a disabling multi-system malformation disorder that is often associated with deafness, visual impairment and intellectual disability. 26813943 2016
Entrez Id: 6910
Gene Symbol: TBX5
TBX5
0.100 GeneticVariation group BEFREE We report on a combination of congenital malformations in a mother and her fetus harboring a heterozygous deletion encompassing the TBX5 and TBX3 genes, which are disease-causing in Holt-Oram and ulnar-mammary syndromes, respectively. 23713051 2013
Entrez Id: 5979
Gene Symbol: RET
RET
0.100 Biomarker group BEFREE It is possible that subtle malformations in the ENS may result from RET dysfunction which then predisposes the individual to environmental influences which initiate the later onset of muscle degeneration. 23053599 2012
Entrez Id: 6223
Gene Symbol: RPS19
RPS19
0.100 GeneticVariation group BEFREE Mutations in the ribosomal protein S19 gene (RPS19) have been found in 25% of patients with Diamond-Blackfan anemia, a rare syndrome of congenital bone marrow failure characterized by erythroblastopenia and various malformations. 18768533 2008