Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 324
Gene Symbol: APC
APC
0.400 AlteredExpression group BEFREE An important role for beta-catenin pathways in colorectal carcinogenesis was first suggested by the protein's association with adenomatous polyposis coli (APC) protein, and by evidence of dysregulation of beta-catenin protein expression at all stages of the adenoma-carcinoma sequence. 11839557 2002
Entrez Id: 7253
Gene Symbol: TSHR
TSHR
0.400 GeneticVariation group BEFREE Sequencing of all exons of the TSHR gene in one family with hyperthyroidism revealed a mutation in exon 10 (T6321), which was first identified in toxic adenomas and found to constitutively activate the TSHR. 11127522 2000
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE Hierarchical clustering isolated three relevant clusters: (i) cluster of microsatellite stable mucinous adenocarcinomas (54%) with KRAS mutation, and frequent MGMT changes, more frequently located in the left colon, often associated with contiguous precursor adenoma; (ii) cluster of BRAF-mutated mucinous adenocarcinomas (28%) with either microsatellite instability-high or microsatellite stable status, occurring in elderly female patients, nearly all located in the right colon, having the signature of serrated pathway of carcinomas; and (iii) a heterogeneous cluster of microsatellite instability-high mucinous carcinomas (18%), including inherited colorectal carcinomas, displaying a high-grade histological pattern. 28429715 2017
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.400 AlteredExpression group BEFREE Interestingly, an inverse correlation was found between expression of pSer70 Bcl-2 and Ki-67 antigen in those cases of cancer in adenoma (P < 0.01). 16243795 2005
Entrez Id: 9049
Gene Symbol: AIP
AIP
0.400 GeneticVariation group BEFREE AIP variants were detected in 3% of the 127 patients, comprising four of 48 patients with acromegaly (8%), 0 of 43 with prolactinomas, 0 of the 20 patients with non-functioning adenomas, 0 of 15 with corticotroph adenomas and 0 of one with a thyrotroph adenomas. 25184284 2014
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE Our results demonstrate that KRAS are more prevalent than BRAF mutations in SAC (42.7% vs. 25.8%; p = 0.011) being the KRAS-mutated cases even more abundant in SAC displaying adjacent serrated adenomas (51%). 22287190 2012
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.400 Biomarker group BEFREE The molecular phenotype, p27(+)Bcl-2(+)Ki-67(-)mdm2(+), was observed in 76%, 29%, and 0% of typical and atypical adenomas and carcinomas, respectively. 12605367 2003
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group BEFREE Genetic alterations in the mutation cluster region of the APC gene occurred significantly more frequently in large adenomas and showed a trend towards an increase in villous adenomas and adenomas with moderate and severe dysplasia. 9828834 1998
Entrez Id: 5617
Gene Symbol: PRL
PRL
0.400 Biomarker group BEFREE Because human epidermal growth factor receptor 2 (HER2)/ErbB2 is overexpressed in prolactinomas and ErbB receptor ligands regulate prolactin (PRL) gene expression, we tested the role of HER2/ErbB2 in prolactinoma hormone regulation and adenoma cell proliferation to assess the rationale for targeting this receptor for prolactinoma therapy. 21106881 2011
Entrez Id: 7253
Gene Symbol: TSHR
TSHR
0.400 Biomarker group BEFREE The absence of a significant difference between the adenoma and the surrounding normal tissue was maintained after dividing the patients into two groups, according to TSH receptor status. 12039695 2002
Entrez Id: 5617
Gene Symbol: PRL
PRL
0.400 AlteredExpression group BEFREE Thus, the study of PRL gene expression and immunohistochemistry in GH-secreting adenomas is valuable to understanding the pathophysiology of pituitary tumors. 2338572 1990
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 GeneticVariation group BEFREE To investigate whether CAF radiosensitization correlated with lack of wild-type (wt) p53, we studied transfected derivatives of an adenoma-derived cell line (PC/AA/C1), in which the endogenous wt p53 activity was disrupted by the expression of a dominant negative (273Arg-->His) p53 mutant protein (designated AA/273p53/B). 9815821 1997
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE In the univariate analysis, KRAS mutations were associated with the development of metachronous advanced polyps (OR: 2.36, 95% CI: 1.22-4.58; P = 0.011), and specifically, advanced adenomas (OR: 2.42, 95% CI: 1.13-5.21; P = 0.023). 28953955 2017
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group BEFREE Genetic analyses were performed in 29 APC gene mutation-negative Jewish individuals with 5 to > or = 40 colonic adenomas who did not fulfill Amsterdam (clinical) criteria for Lynch syndrome. 21287799 2010
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 GeneticVariation group BEFREE The data indicate the GSTM1 null and CYP2D6 EM genotypes are not associated with altered expression of p53 or, mutation of gsp and ras in these adenomas and, suggest the CYP2D6 PM genotype is associated with a reduced risk of pituitary adenomas and, that GSTM1*B confers greater protection than GSTM1*A. 7614700 1995
Entrez Id: 324
Gene Symbol: APC
APC
0.400 Biomarker group BEFREE For the APC gene, the incidence of LOH in the adenomas did not vary by histological type; the LOH status of the adenoma was associated with that of the paired carcinoma; but when both paired lesions had LOH of the APC gene, only 50% had LOH for the same allele. 11241408 2001
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group BEFREE Introduction of a mutant APC allele into these mice substantially increases the number of these adenomas. 10489374 1999
Entrez Id: 5617
Gene Symbol: PRL
PRL
0.400 AlteredExpression group BEFREE A significantly higher content of CRABP1 mRNA was observed in NFPA compared to functioning adenomas, and PRL-secreting adenomas showed a lower expression of this gene compared to normal pituitary. 21270509 2011
Entrez Id: 5617
Gene Symbol: PRL
PRL
0.400 Biomarker group BEFREE In addition,1 of 2 ACTH tumors but no GH (n = 4) or PRL (n = 1) adenoma examined were hypermethylated. 11740049 2001
Entrez Id: 7253
Gene Symbol: TSHR
TSHR
0.400 GeneticVariation group BEFREE The oncogenic potential of a novel somatic mutant TSHR delta 619 identified in a hyperfunctioning adenoma in this study is at present uncertain because of its intact function. 7673402 1995
Entrez Id: 5617
Gene Symbol: PRL
PRL
0.400 Biomarker group BEFREE Pit-1 mRNA was detected in 12 (80%) of 15 prolactin-producing adenomas. 8733768 1996
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 Biomarker group BEFREE When adjusting for confounders with logistic regression, several significant associations were evident including adenoma size with male sex and p53 reactivity; cavernous sinus invasion with size and elevated MIB-1 proliferation index; suprasellar/subfrontal extension with p53 reactivity; and infrasellar invasion with adenoma size alone. 25979255 2015
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 AlteredExpression group BEFREE Of 25 duodenal adenomas, K-ras mutation was found in three (two mildly dysplastic, one moderately dysplastic), 20 showed positive p53 immunostaining, and mutation of the TP53 gene was found in one moderately dysplastic adenoma. p53 protein overexpression in duodenal adenomas was significantly more frequent than mutation of either K-ras or TP53 (P < 0.01). 9189100 1997
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 Biomarker group BEFREE However, immunohistochemical studies of β-catenin in sessile serrated adenomas have shown wide variability, producing conflicting results on Wnt signalling activation in sessile serrated adenomas. 22412046 2012
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 Biomarker group BEFREE Dual staining emphasized the strong interaction of β-catenin and NICD in adenoma and adenocarcinoma than in normal tissues. 25073953 2014