Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 AlteredExpression group BEFREE Adenomas and carcinomas showing both nuclear and reduced membranous expression of beta-catenin, compared with those with normal membranous expression, tended to show allele loss ( P<0.01). 11956815 2002
Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
0.100 GeneticVariation group BEFREE Adenomas and carcinomas from patients with MYH biallelic mutation showed a different pattern of expression: a strong granular cytoplasmic staining was observed without any nuclear expression. 16890597 2006
Entrez Id: 6422
Gene Symbol: SFRP1
SFRP1
0.070 GeneticVariation group BEFREE Adenoma and early tumor Stage I (International Union Against Cancer) displayed both unmethylated and methylated secreted frizzled-related protein-1 promoter sequences, whereas advanced tumor stages showed only methylated secreted frizzled-related protein-1 (P = 0.05). 17762966 2007
Entrez Id: 8877
Gene Symbol: SPHK1
SPHK1
0.020 AlteredExpression group BEFREE Adenomas had higher expression of SphK1 vs. normal mucosa, and colon cancers with metastasis had higher expression of SphK1 than those without metastasis. 18824518 2009
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE Adenomas rarely showed BRAF mutations (1/16, 6%), and no cases of gallbladder carcinoma or high-grade dysplasia were positive for BRAF mutations. 21307665 2011
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE Adenoma with intermediate-methylation epigenotype correlated to KRAS-mutation((+)). 22115708 2012
Entrez Id: 2064
Gene Symbol: ERBB2
ERBB2
0.070 AlteredExpression group BEFREE Adenomas and carcinomas exhibited a significantly higher HER2 mRNA expression when compared to normal mammary glands, although no significant difference between benign and malignant tumors was noticed by qRT-PCR. 26088453 2015
Entrez Id: 324
Gene Symbol: APC
APC
0.400 GeneticVariation group BEFREE Adenomas had lower mutational rates than did colorectal cancers and showed recurrent alterations in known cancer driver genes (APC, KRAS, FBXW7, TCF7L2) and AIs in chromosomes 5, 7, and 13. 27221540 2016
Entrez Id: 407040
Gene Symbol: MIR34A
MIR34A
0.040 Biomarker group BEFREE Adenomas and derived tumoroids of ApcMin/+ mice with disruption of Mir34a, Mir34b, and Mir34c had increased levels of PPP1R11. 28435028 2017
Entrez Id: 2688
Gene Symbol: GH1
GH1
0.100 AlteredExpression group BEFREE Adenoma volumes positively correlated with baseline plasma GH levels before and after oral glucose administration, and with plasma IGF-I and PRL levels. 28472827 2017
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE Adenoma-carcinoma sequence of colorectum. Prevalence of K-ras gene mutation in adenomas with increasing degree of dysplasia and aneuploidy. 7493139 1995
Entrez Id: 4524
Gene Symbol: MTHFR
MTHFR
0.100 GeneticVariation group BEFREE MTHFR polymorphism, methyl-replete diets and the risk of colorectal carcinoma and adenoma among U.S. men and women: an example of gene-environment interactions in colorectal tumorigenesis. 10064332 1999
Entrez Id: 5172
Gene Symbol: SLC26A4
SLC26A4
0.030 Biomarker group BEFREE Pendrin is closely related to a family of sulfate transport proteins that includes the rat sulfate-anion transporter (encoded by Sat-1; 29% amino acid sequence identity), the human diastrophic dysplasia sulfate transporter (encoded by DTD; 32%) and the human sulfate transporter 'downregulated in adenoma' (encoded by DRA; 45%). 10192399 1999
Entrez Id: 79577
Gene Symbol: CDC73
CDC73
0.100 Biomarker group BEFREE Familial isolated hyperparathyroidism caused by single adenoma: a distinct entity different from multiple endocrine neoplasia. 10395244 1998
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.030 AlteredExpression group BEFREE TERT protein was expressed in the nuclei of the adenoma cells at moderate levels, that were not necessarily comparable with the telomerase activities. 10429648 1999
Entrez Id: 7173
Gene Symbol: TPO
TPO
0.050 AlteredExpression group BEFREE TPO expression was decreased in thyroid carcinomas, but was normal in cold adenomas; it was increased in toxic adenomas and Graves' thyroid tissues Tg expression was decreased in thyroid carcinomas, but was normal in the other tissues. 10487692 1999
Entrez Id: 7472
Gene Symbol: WNT2
WNT2
0.010 AlteredExpression group BEFREE Wnt 2 and wnt 5a were significantly up-regulated in the progression from normal through adenoma to carcinoma. 10507776 1999
Entrez Id: 570
Gene Symbol: BAAT
BAAT
0.020 Biomarker group BEFREE BAT-26 positivity was detected in 1 of 6 hyperplastic polyps (16.7%) and in 2 of 10 adenomas (20%) without malignant transformation. 10547536 1999
Entrez Id: 5888
Gene Symbol: RAD51
RAD51
0.010 AlteredExpression group BEFREE RAD51 mRNA expression was investigated by reverse transcription-polymerase chain reaction (RT-PCR), and sequence analysis of the entire coding region of the RAD51 cDNA was performed in all nine adenomas. 10583305 1999
Entrez Id: 2191
Gene Symbol: FAP
FAP
0.080 GeneticVariation group BEFREE FAP coli patients treated by prophylactic surgery are now known to be at risk of developing adenomas anywhere in the intestine and many affected patients later die from upper gastrointestinal tumors. 10604226 1999
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 Biomarker group BEFREE KRAS activation (an early event in polypoid colorectal adenomas) apparently does not play a significant role in nonpolypoid adenoma development but may result in the development of a polypoid configuration. 10612810 2000
Entrez Id: 5626
Gene Symbol: PROP1
PROP1
0.030 AlteredExpression group BEFREE Prop-1 expression was detected in all 34 pituitary adenomas, including 6 corticotroph adenomas and 5 gonadotroph adenomas. 10902805 2000
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.400 GeneticVariation group BEFREE K-ras gene mutations were detected with high frequency in 50% or more cases of the adenomas (14 of 19), borderline tumors (4 of 7), and carcinomas (8 of 11), whereas LOH of the p53 gene was limited to carcinomas (3 of 5 informative cases, 60%) and always accompanied by K-ras gene mutation. 10923915 2000
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.400 Biomarker group BEFREE Beta-catenin and adenomatous polyposis coli (APC) mutations in adenomas from hereditary non-polyposis colorectal cancer patients. 10936679 2000
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.080 Biomarker group BEFREE Ptx1 was detected in 10/14 (71.4%) of growth hormone (GH)-secreting adenomas, 12/12 (100%) of prolactin (PRL)-secreting adenomas, 18/20 (90%) of adrenocorticotropic hormone (ACTH)-secreting adenomas, 6/7 (85.7%) of thyroid-stimulating hormone (TSH)-secreting adenomas, and 17/20 (85%) of clinically non-functioning adenomas, including 9/10 (90%) of gonadotropin-subunit-positive adenomas. 11048804 2000