Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5972
Gene Symbol: REN
REN
0.010 Biomarker group BEFREE Evaluation of Renin and Soluble (Pro)renin Receptor in Patients with IPF. A Comparison with Hypersensitivity Pneumonitis. 31616976 2019
Entrez Id: 6361
Gene Symbol: CCL17
CCL17
0.010 Biomarker group BEFREE Higher serum CCL17 and lower serum CXCL9 were important predictors of worsening lung function in patients with chronic bird-related HP. 31369605 2019
Entrez Id: 4283
Gene Symbol: CXCL9
CXCL9
0.010 Biomarker group BEFREE Higher serum CCL17 and lower serum CXCL9 were important predictors of worsening lung function in patients with chronic bird-related HP. 31369605 2019
Entrez Id: 6359
Gene Symbol: CCL15
CCL15
0.010 AlteredExpression group BEFREE Serum CCL15 levels in CHP patients (29.1 ± 2.1 μg/mL) were significantly higher than those of idiopathic pulmonary fibrosis patients (19.7 ± 1.3 μg/mL, p = 0.01) and healthy subjects (19.5 ± 1.7 μg/mL, p = 0.003). 31416084 2019
Entrez Id: 10159
Gene Symbol: ATP6AP2
ATP6AP2
0.010 AlteredExpression group BEFREE Unlike renin, the serum levels of sPRR were lower in IPF and cHP patients than in control individuals. 31616976 2019
Entrez Id: 10631
Gene Symbol: POSTN
POSTN
0.010 Biomarker group BEFREE Serum periostin was significantly higher in patients with chronic bird-related HP compared to the healthy volunteers. 30871804 2019
Entrez Id: 4313
Gene Symbol: MMP2
MMP2
0.010 AlteredExpression group BEFREE <i>MMP2</i> Polymorphism Affects Plasma Matrix Metalloproteinase (MMP)-2 Levels, and Correlates with the Decline in Lung Function in Hypersensitivity Pneumonitis Positive to Autoantibodies Patients. 31590404 2019
Entrez Id: 450095
Gene Symbol: PLF
PLF
0.010 Biomarker group BEFREE Hypersensitivity Pneumonitis: Radiologic Phenotypes Are Associated With Distinct Survival Time and Pulmonary Function Trajectory. 30243979 2019
Entrez Id: 213
Gene Symbol: ALB
ALB
0.010 Biomarker group BEFREE Multivariate Cox proportional hazards analysis revealed that high BALF CCL15/Alb and poor prognosis were statistically significantly independently correlated in CHP patients (HR 1.1, 95% CI 1.03-1.18, p = 0.004). 31416084 2019
Entrez Id: 79148
Gene Symbol: MMP28
MMP28
0.010 AlteredExpression group BEFREE In both cohorts, serum concentrations of MMP28 were significantly higher in IPF versus non-IPF (mostly with lung fibrosis associated to autoimmune diseases and chronic hypersensitivity pneumonitis) and healthy controls (ANOVA, p<0.0001). 30208119 2018
Entrez Id: 358
Gene Symbol: AQP1
AQP1
0.010 AlteredExpression group BEFREE Here we analyzed expression of AQP1 in lung biopsies of patients diagnosed with IPF, and compared it to biopsies derived from patients with diverse lung pneumonies, such as hypersensitivity pneumonitis, sarcoidosis or normal lungs. 29774214 2018
Entrez Id: 220972
Gene Symbol: MARCHF8
MARCHF8
0.010 Biomarker group BEFREE The terms "hypersensitivity pneumonitis" and "extrinsic allergic alveolitis" were used, with the search starting on January 9, 2017, and concluding March 8, 2017. 28613913 2018
Entrez Id: 3559
Gene Symbol: IL2RA
IL2RA
0.010 AlteredExpression group BEFREE MSCs from HP did not reduce T-cell proliferation based on CFSE MFI values, while the level of CD25 expression on both control and HP-derived CD4+ and CD8+ T-cells was significantly reduced by normal MSCs, while HP-derived MSCs did not have any significant effect. 27792269 2018
Entrez Id: 3669
Gene Symbol: ISG20
ISG20
0.010 AlteredExpression group BEFREE MSCs from HP did not reduce T-cell proliferation based on CFSE MFI values, while the level of CD25 expression on both control and HP-derived CD4+ and CD8+ T-cells was significantly reduced by normal MSCs, while HP-derived MSCs did not have any significant effect. 27792269 2018
Entrez Id: 9628
Gene Symbol: RGS6
RGS6
0.010 Biomarker group BEFREE Automated CT stratification is equivalent to functional indices in the ILD-GAP model for predicting outcome in HP. 28130610 2017
Entrez Id: 3682
Gene Symbol: ITGAE
ITGAE
0.010 AlteredExpression group BEFREE All in all, we demonstrate that CD103 expression by dendritic cells, but not T cells, is crucial for homeostasis maintenance and the regulation of the TH17 airway inflammatory response in hypersensitivity pneumonitis. 28628641 2017
Entrez Id: 6355
Gene Symbol: CCL8
CCL8
0.010 Biomarker group BEFREE The CCL8 concentrations in BAL fluid was significantly higher in 86 patients with IPF than those in 41 controls, and other interstitial lung diseases including non-specific interstitial pneumonia (n = 22), hypersensitivity pneumonitis (n = 20) and sarcoidosis (n = 19) (p < 0.005, respectively). 28057004 2017
Entrez Id: 5921
Gene Symbol: RASA1
RASA1
0.010 Biomarker group BEFREE Automated CT stratification is equivalent to functional indices in the ILD-GAP model for predicting outcome in HP. 28130610 2017
Entrez Id: 1116
Gene Symbol: CHI3L1
CHI3L1
0.010 Biomarker group BEFREE We aimed to investigate the role of YKL-40 as a biomarker in hypersensitivity pneumonitis (HP).72 HP patients, 100 interstitial lung disease (ILD) controls and 60 healthy controls were studied. 27836954 2017
Entrez Id: 90865
Gene Symbol: IL33
IL33
0.010 Biomarker group BEFREE TSLP, IL-25, and IL-33 concentrations were measured in bronchoalveolar lavage fluids obtained from normal controls (NCs; n = 40) and from patients with idiopathic pulmonary fibrosis (IPF; n = 100), non-specific interstitial pneumonia (NSIP; n = 22), hypersensitivity pneumonitis (HP; n = 20), and sarcoidosis (n = 19). 28202030 2017
Entrez Id: 54472
Gene Symbol: TOLLIP
TOLLIP
0.010 GeneticVariation group BEFREE The minor allele frequency (MAF) was greater for MUC5B rs35705950 in patients with chronic hypersensitivity pneumonitis than in healthy controls (24·4% in UCSF and 32·3% in UTSW vs 10·7%, both p<0·0001), but not for TOLLIP rs5743890. 28648751 2017
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.010 GeneticVariation group BEFREE Heterozygous mutations in four telomere-related genes have been linked to pulmonary fibrosis, but little is known about similarities or differences of affected individuals.115 patients with mutations in telomerase reverse transcriptase (TERT) (n=75), telomerase RNA component (TERC) (n=7), regulator of telomere elongation helicase 1 (RTEL1) (n=14) and poly(A)-specific ribonuclease (PARN) (n=19) were identified and clinical data were analysed.Approximately one-half (46%) had a multidisciplinary diagnosis of idiopathic pulmonary fibrosis (IPF); others had unclassifiable lung fibrosis (20%), chronic hypersensitivity pneumonitis (12%), pleuroparenchymal fibroelastosis (10%), interstitial pneumonia with autoimmune features (7%), an idiopathic interstitial pneumonia (4%) and connective tissue disease-related interstitial fibrosis (3%). 27540018 2016
Entrez Id: 5073
Gene Symbol: PARN
PARN
0.010 Biomarker group BEFREE Heterozygous mutations in four telomere-related genes have been linked to pulmonary fibrosis, but little is known about similarities or differences of affected individuals.115 patients with mutations in telomerase reverse transcriptase (TERT) (n=75), telomerase RNA component (TERC) (n=7), regulator of telomere elongation helicase 1 (RTEL1) (n=14) and poly(A)-specific ribonuclease (PARN) (n=19) were identified and clinical data were analysed.Approximately one-half (46%) had a multidisciplinary diagnosis of idiopathic pulmonary fibrosis (IPF); others had unclassifiable lung fibrosis (20%), chronic hypersensitivity pneumonitis (12%), pleuroparenchymal fibroelastosis (10%), interstitial pneumonia with autoimmune features (7%), an idiopathic interstitial pneumonia (4%) and connective tissue disease-related interstitial fibrosis (3%). 27540018 2016
Entrez Id: 7012
Gene Symbol: TERC
TERC
0.010 Biomarker group BEFREE Heterozygous mutations in four telomere-related genes have been linked to pulmonary fibrosis, but little is known about similarities or differences of affected individuals.115 patients with mutations in telomerase reverse transcriptase (TERT) (n=75), telomerase RNA component (TERC) (n=7), regulator of telomere elongation helicase 1 (RTEL1) (n=14) and poly(A)-specific ribonuclease (PARN) (n=19) were identified and clinical data were analysed.Approximately one-half (46%) had a multidisciplinary diagnosis of idiopathic pulmonary fibrosis (IPF); others had unclassifiable lung fibrosis (20%), chronic hypersensitivity pneumonitis (12%), pleuroparenchymal fibroelastosis (10%), interstitial pneumonia with autoimmune features (7%), an idiopathic interstitial pneumonia (4%) and connective tissue disease-related interstitial fibrosis (3%). 27540018 2016
Entrez Id: 51750
Gene Symbol: RTEL1
RTEL1
0.010 Biomarker group BEFREE Heterozygous mutations in four telomere-related genes have been linked to pulmonary fibrosis, but little is known about similarities or differences of affected individuals.115 patients with mutations in telomerase reverse transcriptase (TERT) (n=75), telomerase RNA component (TERC) (n=7), regulator of telomere elongation helicase 1 (RTEL1) (n=14) and poly(A)-specific ribonuclease (PARN) (n=19) were identified and clinical data were analysed.Approximately one-half (46%) had a multidisciplinary diagnosis of idiopathic pulmonary fibrosis (IPF); others had unclassifiable lung fibrosis (20%), chronic hypersensitivity pneumonitis (12%), pleuroparenchymal fibroelastosis (10%), interstitial pneumonia with autoimmune features (7%), an idiopathic interstitial pneumonia (4%) and connective tissue disease-related interstitial fibrosis (3%). 27540018 2016