Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 93107
Gene Symbol: KCNG4
KCNG4
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify KCNG3 and KCNG4 gene expression, and immunolabelling of KCNG3 and KCNG4 proteins was visualized using confocal microscopy. 30386900 2019
Entrez Id: 1910
Gene Symbol: EDNRB
EDNRB
0.010 Biomarker disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Scn1b and Fxyd1 gene expression, and immunolabelling of Scn1b and Fxyd1 proteins were visualized using confocal microscopy. 30386899 2019
Entrez Id: 857
Gene Symbol: CAV1
CAV1
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 10) were collected at the time of pull-through surgery and control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 10). qRT-PCR analysis was undertaken to quantify Cav-1 gene expression, and Western blot analysis was undertaken to determine Cav-1 protein quantification. 31256294 2019
Entrez Id: 170850
Gene Symbol: KCNG3
KCNG3
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify KCNG3 and KCNG4 gene expression, and immunolabelling of KCNG3 and KCNG4 proteins was visualized using confocal microscopy. 30386900 2019
Entrez Id: 6262
Gene Symbol: RYR2
RYR2
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Ryr1, Ryr2 and Ryr3 gene expression, and immunolabelling of Ryr1, Ryr2 and Ryr3 proteins was visualised using confocal microscopy. 31263958 2019
Entrez Id: 6263
Gene Symbol: RYR3
RYR3
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Ryr1, Ryr2 and Ryr3 gene expression, and immunolabelling of Ryr1, Ryr2 and Ryr3 proteins was visualised using confocal microscopy. 31263958 2019
Entrez Id: 6261
Gene Symbol: RYR1
RYR1
0.010 Biomarker disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Ryr1, Ryr2 and Ryr3 gene expression, and immunolabelling of Ryr1, Ryr2 and Ryr3 proteins was visualised using confocal microscopy. 31263958 2019
Entrez Id: 5348
Gene Symbol: FXYD1
FXYD1
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Scn1b and Fxyd1 gene expression, and immunolabelling of Scn1b and Fxyd1 proteins were visualized using confocal microscopy. 30386899 2019
Entrez Id: 6324
Gene Symbol: SCN1B
SCN1B
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify Scn1b and Fxyd1 gene expression, and immunolabelling of Scn1b and Fxyd1 proteins were visualized using confocal microscopy. 30386899 2019
Entrez Id: 50801
Gene Symbol: KCNK4
KCNK4
0.010 AlteredExpression disease BEFREE HSCR tissue specimens (n = 6) were collected at the time of pull-through surgery, while control samples were obtained at the time of colostomy closure in patients with imperforate anus (n = 6). qRT-PCR analysis was undertaken to quantify TRAAK gene expression, and immunolabelling of TRAAK proteins was visualized using confocal microscopy. 31542828 2019
Entrez Id: 11020
Gene Symbol: IFT27
IFT27
0.010 GeneticVariation disease BEFREE Here we describe a fetus with an unclassified severe ciliopathy phenotype including short ribs, polydactyly, bilateral renal agenesis, and imperforate anus, with compound heterozygosity for c.118_125del, p.(Thr40Glyfs*11) and a c.352 +1G > T in IFT27, which encodes a small GTPase component of the IFT-B complex. 29704304 2018
Entrez Id: 8626
Gene Symbol: TP63
TP63
0.010 GeneticVariation disease BEFREE Ectodermal Defects and Anal Atresia in a Child with a TP63 Mutation--Expanding the Phenotypic Spectrum. 25209878 2016
Entrez Id: 22943
Gene Symbol: DKK1
DKK1
0.010 Biomarker disease BEFREE A recently published article showed that deletion of one single gene, dickkopf WNT signaling pathway inhibitor-1 (Dkk1), resulted in an imperforate anus with rectourinary fistula and preputial hypospadias in mice. 25319845 2015
Entrez Id: 7008
Gene Symbol: TEF
TEF
0.010 GeneticVariation disease BEFREE The frequency of each component was: vertebral defects (V), 77 %; anal atresia (A), 62 %; tracheo-esophageal fistula/esophageal atresia (TEF/EA), 58 %; renal anomalies (R), 58 %; limb abnormalities (L), 50 %, and cardiac malformations (C), 42 %. 25008186 2015
Entrez Id: 2736
Gene Symbol: GLI2
GLI2
0.010 Biomarker disease BEFREE We used the pig as the model to study the contribution of GLI2 to AA. 24213835 2013
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.010 Biomarker disease BEFREE While SOX2 haploinsufficiency is known to cause microphthalmia and coloboma, it has not been described before in patients with anal atresia. 23613260 2013
Entrez Id: 101927895
Gene Symbol: EMC1-AS1
EMC1-AS1
0.100 GeneticVariation disease CLINVAR Whole-exome sequencing in the molecular diagnosis of individuals with congenital anomalies of the kidney and urinary tract and identification of a new causative gene. 27657687 2017
Entrez Id: 25
Gene Symbol: ABL1
ABL1
0.100 CausalMutation disease CLINVAR Germline mutations in ABL1 cause an autosomal dominant syndrome characterized by congenital heart defects and skeletal malformations. 28288113 2017
Entrez Id: 23065
Gene Symbol: EMC1
EMC1
0.100 GeneticVariation disease CLINVAR Whole-exome sequencing in the molecular diagnosis of individuals with congenital anomalies of the kidney and urinary tract and identification of a new causative gene. 27657687 2017
Entrez Id: 101927895
Gene Symbol: EMC1-AS1
EMC1-AS1
0.100 GeneticVariation disease CLINVAR Monoallelic and Biallelic Variants in EMC1 Identified in Individuals with Global Developmental Delay, Hypotonia, Scoliosis, and Cerebellar Atrophy. 26942288 2016
Entrez Id: 23065
Gene Symbol: EMC1
EMC1
0.100 GeneticVariation disease CLINVAR Monoallelic and Biallelic Variants in EMC1 Identified in Individuals with Global Developmental Delay, Hypotonia, Scoliosis, and Cerebellar Atrophy. 26942288 2016
Entrez Id: 7547
Gene Symbol: ZIC3
ZIC3
0.100 Biomarker disease HPO
Entrez Id: 9401
Gene Symbol: RECQL4
RECQL4
0.100 Biomarker disease HPO
Entrez Id: 7473
Gene Symbol: WNT3
WNT3
0.100 Biomarker disease HPO
Entrez Id: 28952
Gene Symbol: CCDC22
CCDC22
0.100 Biomarker disease HPO