Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 10716
Gene Symbol: TBR1
TBR1
0.650 GeneticVariation disease BEFREE Here we demonstrate the power of the approach, performing the first functional analyses of TBR1 variants identified in sporadic autism. 25232744 2014
Entrez Id: 5080
Gene Symbol: PAX6
PAX6
0.530 GeneticVariation disease BEFREE While the Wilms tumor/genitourinary anomalies and aniridia are caused by deletion of WT1 and PAX6 respectively, the genomic cause of mental retardation and autism in WAGR syndrome remains unknown. 19096215 2008
Entrez Id: 50944
Gene Symbol: SHANK1
SHANK1
0.530 GeneticVariation disease BEFREE Copy-number variants and truncating mutations in SHANK genes were present in ∼1% of patients with ASD: mutations in SHANK1 were rare (0.04%) and present in males with normal IQ and autism; mutations in SHANK2 were present in 0.17% of patients with ASD and mild intellectual disability; mutations in SHANK3 were present in 0.69% of patients with ASD and up to 2.12% of the cases with moderate to profound intellectual disability. 25188300 2014
Entrez Id: 50944
Gene Symbol: SHANK1
SHANK1
0.530 GeneticVariation disease BEFREE Mutations in <i>SHANK1-3</i> are prevalent in patients with autism spectrum disorders (ASD), and loss of one copy of <i>SHANK3</i> causes Phelan-McDermid Syndrome, a syndrome in which Autism occurs in >80% of cases. 30405356 2018
Entrez Id: 50944
Gene Symbol: SHANK1
SHANK1
0.530 GeneticVariation disease BEFREE The discovery of apparent reduced penetrance of ASD in females bearing inherited autosomal SHANK1 deletions provides a possible contributory model for the male gender bias in autism. 22503632 2012
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.500 GeneticVariation disease BEFREE In particular, BDNF may modulate the risk of autism in WAGR patients as suggested by its link with Rett syndrome as a target of MECP2. 19096215 2008
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.500 GeneticVariation disease BEFREE One such gene is CNTNAP2 encoding contactin-associated protein 2 (CASPR2), which harbours mutations associated to autism, schizophrenia, and intellectual disability. 30843029 2019
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.500 GeneticVariation disease BEFREE We propose dividing syndromic autism into the following two groups: (i) ASD that occurs in the context of a clinically defined syndrome-recognizing these disorders depends on the familiarity of the clinician with the features of the syndrome, and the diagnosis is typically confirmed by targeted genetic testing (eg, mutation screening of FMR1); (ii) ASD that occurs as a feature of a molecularly defined syndrome-for this group of patients, ASD-associated variants are identified by genome-wide testing that is not hypothesis driven (eg, microarray, whole exome sequencing). 29398931 2017
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.500 GeneticVariation disease BEFREE Mutations in the contactin-associated protein 2 (CNTNAP2) gene encoding CASPR2, a neurexin-related cell-adhesion molecule, predispose to autism, but the function of CASPR2 in neural circuit assembly remains largely unknown. 23074245 2012
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.500 GeneticVariation disease BEFREE In this study, we evaluated 203 Thai children who met the criteria of the Diagnostic and Statistical Manual of Mental Disorders, 4th edition (DSM-IV), for autistic disorder or pervasive developmental disorder not otherwise specified (PDD-NOS), and who had neither major dysmorphic features nor CGG repeat expansions of the FMR1 gene. 25171325 2014
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.500 GeneticVariation disease BEFREE Genetic variation in the contactin associated protein-like 2 (CNTNAP2) gene, including copy number variations, exon deletions, truncations, single nucleotide variants, and polymorphisms have been associated with intellectual disability, epilepsy, schizophrenia, language disorders, and autism. 25918374 2015
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.500 GeneticVariation disease BEFREE Shank3 mutation in a mouse model of autism leads to changes in the S-nitroso-proteome and affects key proteins involved in vesicle release and synaptic function. 29988084 2018
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.500 GeneticVariation disease BEFREE We introduce findings in a rat model, and assess the impact of mutations in Shank3, an autism risk gene. 29377611 2018
Entrez Id: 57502
Gene Symbol: NLGN4X
NLGN4X
0.500 GeneticVariation disease BEFREE To enquire on the relevance and frequency of neuroligin mutations in ASD, we performed a mutation screening of NLGN3 and NLGN4X in a sample of 124 autism probands from the International Molecular Genetic Study of Autism Consortium (IMGSAC). 16508939 2006
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.500 GeneticVariation disease BEFREE Here, we utilized the Shank3B mutant mouse model of autism to investigate how Shank3 mutation may differentially affect striatonigral (direct pathway) and striatopallidal (indirect pathway) medium spiny neurons (MSNs) and its relevance to repetitive grooming behavior in Shank3B mutant mice. 28414301 2017
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.500 GeneticVariation disease BEFREE Human Pluripotent Stem Cell-derived Cortical Neurons for High Throughput Medication Screening in Autism: A Proof of Concept Study in SHANK3 Haploinsufficiency Syndrome. 27333044 2016
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.500 GeneticVariation disease BEFREE The convergence between genetic findings and cognitive-behavioral models of autism provides evidence that genetic variation at CNTNAP2 predisposes to diseases such as autism in part through modulation of frontal lobe connectivity. 21048216 2010
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.500 GeneticVariation disease BEFREE A genetic defect causing autism and epilepsy involving the contactin associated protein-like 2 gene (CNTNAP2) has been discovered in a selected cohort of Amish children. 19302947 2009
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.500 GeneticVariation disease BEFREE Molecular and phenotypic abnormalities in individuals with germline heterozygous PTEN mutations and autism. 25288137 2015
Entrez Id: 23394
Gene Symbol: ADNP
ADNP
0.500 GeneticVariation disease BEFREE The cytoskeleton as a drug target for neuroprotection: the case of the autism- mutated ADNP. 25955282 2016
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.500 GeneticVariation disease BEFREE We investigated several single nucleotide polymorphisms (SNPs) of Forkhead Box P2 (FOXP2) and Protein-Tyrosine Phosphatase, Receptor-type, Zeta-1 (PTPRZ1) at the 7q region in Japanese patients with autism and healthy controls. 15998549 2005
Entrez Id: 23394
Gene Symbol: ADNP
ADNP
0.500 GeneticVariation disease BEFREE We show that individuals with mutations in ADNP have many overlapping clinical features that are distinctive from those of other autism and/or intellectual disability syndromes. 29724491 2019
Entrez Id: 4128
Gene Symbol: MAOA
MAOA
0.500 GeneticVariation disease BEFREE However, the male children carrying 4 tandem repeats in the promoter region of the MAOA gene showed a two-fold higher risk of AU (or AU+ASD) than those carrying allele 3, adjusted for confounders (OR = 2.02, 95% CI = 1.12, 3.65, P = 0.02 for AU vs. TD, and OR = 2.05, 95% CI = 1.19, 3.53, P = 0.01 for ASD vs. TD). 21538940 2011
Entrez Id: 2332
Gene Symbol: FMR1
FMR1
0.500 GeneticVariation disease BEFREE Fragile X Syndrome (FXS) is the main genetic cause of autism and intellectual deficiency resulting the absence of the Fragile X Mental Retardation Protein (FMRP). 28334053 2017
Entrez Id: 57502
Gene Symbol: NLGN4X
NLGN4X
0.500 GeneticVariation disease BEFREE In humans, mutations in NLGN3 and NLGN4 are linked to autism and schizophrenia; NLGN2 missense variants are implicated in schizophrenia. 27865048 2017