Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 57817
Gene Symbol: HAMP
HAMP
0.320 GeneticVariation disease BEFREE The study demonstrates that C allele of rs916145 in USF2 gene has more frequency for developing BA, and decreased USF2 protein nuclear translocation might partly play a role in the decreased hepcidin expression in the cholestatic liver injury of the late stage of BA. 18970934 2008
Entrez Id: 2817
Gene Symbol: GPC1
GPC1
0.320 GeneticVariation disease BEFREE Common variants of GPC1 gene were genetically involved in BA risk. 27373597 2016
Entrez Id: 2817
Gene Symbol: GPC1
GPC1
0.320 GeneticVariation disease BEFREE We observed a statistically significant increase in deletions at 2q37.3 in patients with BA that resulted in deletion of one copy of GPC1, which encodes glypican 1, a heparan sulfate proteoglycan that regulates Hedgehog signaling and inflammation. 23336978 2013
Entrez Id: 2202
Gene Symbol: EFEMP1
EFEMP1
0.110 GeneticVariation disease GWASCAT A genome-wide association study identifies a susceptibility locus for biliary atresia on 2p16.1 within the gene EFEMP1. 30102696 2018
Entrez Id: 100505933
Gene Symbol: ADD3-AS1
ADD3-AS1
0.110 GeneticVariation disease GWASCAT Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 100505933
Gene Symbol: ADD3-AS1
ADD3-AS1
0.110 GeneticVariation disease BEFREE ADD3 and ADD3-AS1 variants increased susceptibility to BA, suggesting that these genes may play an additive role in the pathogenesis of the disease. 29508064 2018
Entrez Id: 100505933
Gene Symbol: ADD3-AS1
ADD3-AS1
0.110 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 285780
Gene Symbol: LY86-AS1
LY86-AS1
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 54715
Gene Symbol: RBFOX1
RBFOX1
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 106479781
Gene Symbol: RNU6-484P
RNU6-484P
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 3241
Gene Symbol: HPCAL1
HPCAL1
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 55100
Gene Symbol: WDR70
WDR70
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 100506272
Gene Symbol: LINC02492
LINC02492
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 84869
Gene Symbol: CBR4
CBR4
0.100 GeneticVariation disease GWASDB Genome-wide association study identifies a susceptibility locus for biliary atresia on 10q24.2. 20460270 2010
Entrez Id: 120
Gene Symbol: ADD3
ADD3
0.060 GeneticVariation disease BEFREE This study suggests that the ADD3 gene plays an important role in BA pathogenesis and reveals a significant association between two SNPs, rs17095355 and rs10509906, and BA. 25285724 2014
Entrez Id: 120
Gene Symbol: ADD3
ADD3
0.060 GeneticVariation disease BEFREE ADD3 and ADD3-AS1 variants increased susceptibility to BA, suggesting that these genes may play an additive role in the pathogenesis of the disease. 29508064 2018
Entrez Id: 120
Gene Symbol: ADD3
ADD3
0.060 GeneticVariation disease BEFREE As a member of membrane skeletal proteins in the liver and bile ducts, a haplotype composed by five single nucleotide polymorphisms (SNPs) on adducin 3 (<i>ADD3</i>) has been identified as associated with BA. 29685956 2018
Entrez Id: 3458
Gene Symbol: IFNG
IFNG
0.060 GeneticVariation disease BEFREE Polymorphisms of the IFNG gene do not appear to play a major role in the genetic predisposition to BA in Taiwanese children. 19756986 2010
Entrez Id: 182
Gene Symbol: JAG1
JAG1
0.060 GeneticVariation disease BEFREE They carried 29 BA-private CNVs, including 3 CNVs underpinning the carriers' immunity comorbidity and one JAG1 micro-deletion. 28416017 2017
Entrez Id: 182
Gene Symbol: JAG1
JAG1
0.060 GeneticVariation disease BEFREE We analysed 30 subjects with Alagille syndrome, nine with incomplete Alagille syndrome and 17 with biliary atresia and detected pathogenic mutations in JAG1 or NOTCH2 in 24/30 subjects with Alagille syndrome and in 4/9 subjects with incomplete Alagille syndrome. 28695677 2017
Entrez Id: 92086
Gene Symbol: GGTLC1
GGTLC1
0.050 GeneticVariation disease BEFREE Markers for high index of clinical suspicion for BA are: a "usually" well thriving infant with conjugated hyperbilirubinemia, raised gamma glutamyl transpeptidase, persistently "acholic" stools, firm hepatomegaly with dysmorphic, hypoplastic gall bladder. 28687948 2017
Entrez Id: 102724197
Gene Symbol: LOC102724197
LOC102724197
0.050 GeneticVariation disease BEFREE Markers for high index of clinical suspicion for BA are: a "usually" well thriving infant with conjugated hyperbilirubinemia, raised gamma glutamyl transpeptidase, persistently "acholic" stools, firm hepatomegaly with dysmorphic, hypoplastic gall bladder. 28687948 2017
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 GeneticVariation disease BEFREE These results suggest that VEGFA gene polymorphism (rs3025039) may not be associated with the risk of BA in the Southern Chinese Han population. 29251369 2018
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.040 GeneticVariation disease BEFREE Association of common genetic variants in VEGFA with biliary atresia susceptibility in Northwestern Han Chinese. 28710035 2017
Entrez Id: 8842
Gene Symbol: PROM1
PROM1
0.040 GeneticVariation disease BEFREE Liver samples collected from BA infants at Kasai portoenterostomy and age-matched controls, as well as from wild-type and Prom1 knockout mice with 3,5-diethoxycarbonyl-1,4-dihydrocollidine (DDC)-induced experimental cholestasis were analyzed histologically using immunofluorescence and by quantitative polymerase chain reaction. 28688656 2017