Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.500 Biomarker group HPO
Entrez Id: 4292
Gene Symbol: MLH1
MLH1
0.200 Biomarker group HPO
Entrez Id: 6794
Gene Symbol: STK11
STK11
0.200 Biomarker group HPO
Entrez Id: 6597
Gene Symbol: SMARCA4
SMARCA4
0.200 Biomarker group HPO
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.200 Biomarker group HPO
Entrez Id: 324
Gene Symbol: APC
APC
0.200 Biomarker group HPO
Entrez Id: 1027
Gene Symbol: CDKN1B
CDKN1B
0.200 Biomarker group HPO
Entrez Id: 4436
Gene Symbol: MSH2
MSH2
0.200 Biomarker group HPO
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.190 Biomarker group HPO
Entrez Id: 5426
Gene Symbol: POLE
POLE
0.170 Biomarker group HPO
Entrez Id: 5424
Gene Symbol: POLD1
POLD1
0.150 Biomarker group HPO
Entrez Id: 8915
Gene Symbol: BCL10
BCL10
0.150 Biomarker group HPO
Entrez Id: 1736
Gene Symbol: DKC1
DKC1
0.100 Biomarker group HPO
Entrez Id: 22861
Gene Symbol: NLRP1
NLRP1
0.100 Biomarker group HPO
Entrez Id: 284654
Gene Symbol: RSPO1
RSPO1
0.100 Biomarker group HPO
Entrez Id: 3897
Gene Symbol: L1CAM
L1CAM
0.100 Biomarker group BEFREE "Low-risk carcinomas" should be limited to L1CAM-negative tumours. 27695947 2017
Entrez Id: 79577
Gene Symbol: CDC73
CDC73
0.100 GeneticVariation group BEFREE "Two-hits" (double mutations or one mutation and loss of heterozygosity at 1q24-32) affecting HRPT2 were found in two sporadic carcinomas, two HPT-JT-related and two FIHP related tumours. 12960210 2003
Entrez Id: 407041
Gene Symbol: MIR34B
MIR34B
0.020 Biomarker group BEFREE <b>Objectives:</b> MiR-34b is a tumour suppressor in different kinds of carcinomas. 31119955 2019
Entrez Id: 2065
Gene Symbol: ERBB3
ERBB3
0.100 Biomarker group BEFREE <b>Purpose:</b> This study investigated the safety, clinical activity, and target-associated biomarkers of lumretuzumab, a humanized, glycoengineered, anti-HER3 monoclonal antibody (mAb), in combination with the EGFR-blocking agents erlotinib or cetuximab in patients with advanced HER3-positive carcinomas.<b>Experimental Design:</b> The study included two parts: dose escalation and dose extension phases with lumretuzumab in combination with either cetuximab or erlotinib, respectively. 28600476 2017
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.400 Biomarker group BEFREE <b>Purpose:</b> This study investigated the safety, clinical activity, and target-associated biomarkers of lumretuzumab, a humanized, glycoengineered, anti-HER3 monoclonal antibody (mAb), in combination with the EGFR-blocking agents erlotinib or cetuximab in patients with advanced HER3-positive carcinomas.<b>Experimental Design:</b> The study included two parts: dose escalation and dose extension phases with lumretuzumab in combination with either cetuximab or erlotinib, respectively. 28600476 2017
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.100 GeneticVariation group BEFREE <i>BRAF V600E</i> mutation associated with papillary (94/139, 68%), poorly differentiated (4/39, 10%), and anaplastic (3/12, 25%) carcinomas. 29695638 2018
Entrez Id: 6484
Gene Symbol: ST3GAL4
ST3GAL4
0.020 Biomarker group BEFREE <i>In silico</i> expression analysis of α2-3 sialyltransferase ST3Gal IV and SLe<sup>x</sup> protein carrier was performed and the conjoint expression of the SLe<sup>x</sup> modified glycoproteins evaluated by immunohistochemistry and PLA in a series of gastric carcinomas. 31695778 2019
Entrez Id: 100302234
Gene Symbol: MIR664A
MIR664A
0.010 Biomarker group BEFREE <i>In silico</i> target-prediction and network analysis showed miR-664 and miR-1301 as organized in predicted GRNs with genes interested in parathyroid adenomas and carcinomas. 28469779 2017
Entrez Id: 100302246
Gene Symbol: MIR1301
MIR1301
0.010 Biomarker group BEFREE <i>In silico</i> target-prediction and network analysis showed miR-664 and miR-1301 as organized in predicted GRNs with genes interested in parathyroid adenomas and carcinomas. 28469779 2017
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.100 Biomarker group BEFREE <i>K</i><sub>ep</sub> kurtosis and <i>V</i><sub>e</sub> min can differentiate p16 positive and p16 negative carcinomas. 30718984 2019