Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 Biomarker disease BEFREE Effect of Interferon-γ on the Basal and the TNFα-Stimulated Secretion of CXCL8 in Thyroid Cancer Cell Lines Bearing Either the RET/PTC Rearrangement Or the BRAF V600e Mutation. 27555670 2016
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE We evaluated the best tagging SNPs from our previous PTC study and additionally included SNPs in or near FOXE1 and NKX2-1 genes, known susceptibility loci for thyroid cancer. 27207655 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE In all cases the detection of BRAF V600E mutation was associated with histopathologically proving the presence of TC (specificity of the test - 100%). 26884114 2016
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE Systematic Analysis of Tyrosine Kinase Inhibitor Response to RET Gatekeeper Mutations in Thyroid Cancer. 27712045 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 AlteredExpression disease BEFREE We investigated the role of PD-L1 in thyroid cancer with respect to BRAF mutation and MAP kinase pathway activity and the effect of anti PD-L1 antibody therapy on tumor regression and intra-tumoral immune response alone or in combination with BRAF inhibitor (BRAFi). 26943572 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE In this study, we investigated the relationship between the TME and thyroid cancer progression in a mouse model where thyroid-specific expression of oncogenic BRAF and loss of Pten (Braf(V600E)/Pten(-/-)/TPO-Cre) leads to papillary thyroid cancers (PTC) that rapidly progress to poorly differentiated thyroid cancer (PDTC). 26818109 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Triple combination of PLX4032, SAHA, and TSH is a specific robust regimen to restore RAI avidity in RAI-refractory BRAF V600E-positive thyroid cancer, which warrants clinical trials to confirm. 26751190 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 Biomarker disease BEFREE We have identified previously undiscovered BRAF in-frame deletions near the αC-helix region of the kinase domain in pancreatic, lung, ovarian, and thyroid cancers. 26732095 2016
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 Biomarker disease BEFREE This substance also significantly suppresses growth of thyroid cancer-derived TT cell lines and Ba/F3 cells transformed with various RET mutants. 26652860 2016
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 Biomarker disease BEFREE RET, BRAF and other protein kinases have been identified as major molecular players in thyroid cancer. 27058903 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 AlteredExpression disease BEFREE As a result of BRAF kinase inhibition, reduction in MEK kinase activity was seen (p < 0.05) in both thyroid cancer cell lines (72 and 75 %, respectively). 27179656 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 Biomarker disease BEFREE BRAF fusions included 3% (14/531) of melanomas; 2% (15/701) of gliomas; 1.0% (3/294) of thyroid cancers; 0.3% (3/1,062) pancreatic carcinomas; 0.2% (8/4,013) nonsmall-cell lung cancers and 0.2% (4/2,154) of colorectal cancers, and were enriched in pilocytic (30%) vs. nonpilocytic gliomas (1%; p < 0.0001), Spitzoid (75%) vs. nonSpitzoid melanomas (1%; p = 0.0001), acinar (67%) vs. nonacinar pancreatic cancers (<1%; p < 0.0001) and papillary (3%) vs. nonpapillary thyroid cancers (0%; p < 0.03). 26314551 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE While the majority of seminomas retain a hypo-methylated genome, a small fraction displays a highly methylated genome, resembling hyper-methylated non-seminomas.It is well established from e.g. melanoma, colorectal and thyroid cancer that a methylated phenotype can be correlated to prognosis and can be related to BRAF mutations. 27886677 2016
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE In particular, activating mutations of BRAF, RET or RAS genes are known to be specifically associated with TC initiation, progression and outcome. 25862858 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Evidence has also shown that the detection of the BRAF(V600E) mutation in cancer is crucial in order to identify novel avenues for thyroid cancer treatment.Based on the BRAF kinase structure, novel drugs can potentially be designed to target oncogenic BRAF in cancer therapeutics. 25961545 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE In present result, RET rs1799939, rs1800858 and rs74799832 polymorphisms might be the risk factors for TC. 26191299 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 AlteredExpression disease BEFREE Here, we firstly find CNTN1 is a new gene which can be regulated by RET/PTC3 (Ret proto-oncogene and Ret-activating protein ELE1) rearrangement gene and the protein level of CNTN1 is increasing in thyroid cancer. 26722434 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Somatic mutations in established thyroid cancer genes were detected in 14 of 22 (64%) tumors and included recurrent mutations in BRAF, TP53 and RAS-family genes (6 cases each), as well as PIK3CA (2 cases) and single cases of CDKN1B, CDKN2C, CTNNB1 and RET mutations. 25576899 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE Twenty-four (27%) of 89 patients were diagnosed with thyroid cancer (50% papillary thyroid carcinoma [PTC], 50% follicular variant of papillary thyroid carcinoma [FVPTC]). 25627462 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE Cytomorphologic features in thyroid nodules read as "suspicious for malignancy" on cytology may predict thyroid cancers with the BRAF mutation. 26187369 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 GeneticVariation disease BEFREE BRAF(V600E) mutation analysis is superior to RAS point mutations and evaluation of RET/PTC rearrangements in the diagnosis of thyroid cancer, even in indeterminate lesions. 25333496 2015
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.400 Biomarker disease BEFREE The usefulness of BRAF testing is limited by the low rate of BRAF-positive cases in other categories, thereby highlighting the need to identify other genetic drivers of clinically aggressive thyroid cancers. 25926393 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE In particular, activating mutations of BRAF, RET or RAS genes are known to be specifically associated with TC initiation, progression and outcome. 25862858 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 GeneticVariation disease BEFREE BRAF(V600E) mutation analysis is superior to RAS point mutations and evaluation of RET/PTC rearrangements in the diagnosis of thyroid cancer, even in indeterminate lesions. 25333496 2015
Entrez Id: 5979
Gene Symbol: RET
RET
0.400 Biomarker disease BEFREE Rearranged during transfection (RET)/papillary thyroid carcinoma gene rearrangements, BRAF (B-RAF proto-oncogene, serine/threonine kinase) gene mutations, RAS (rat sarcoma) mutations, and vascular endothelial growth factor receptor 2 angiogenesis pathways are some of the known pathways playing a crucial role in the development of thyroid cancer. 25789503 2015