Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.410 Biomarker group CTD_human The prevalence of PTEN mutations in a clinical pediatric cohort with autism spectrum disorders, developmental delay, and macrocephaly. 19265751 2009
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.410 Biomarker group CTD_human Bannayan-Riley-Ruvalcaba syndrome: a cause of extreme macrocephaly and neurodevelopmental delay. 19321504 2009
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.410 Biomarker group CTD_human Novel PTEN mutations in neurodevelopmental disorders and macrocephaly. 18759867 2009
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.410 Biomarker group BEFREE In the 5 years since the discovery of PTEN, encoding a dual specificity phosphatase tumor suppressor on 10q23, it has been shown to be a susceptibility gene for an inherited cancer syndrome, Cowden syndrome, and for several developmental disorders; it has been shown to play a prominent role in normal murine and human development; and it has been shown to be instrumental in cell cycle arrest, apoptosis, and/or possibly cell migration and cytoskeletal affairs. 12060605 2002
Entrez Id: 5728
Gene Symbol: PTEN
PTEN
0.410 CausalMutation group CLINVAR
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 GeneticVariation group BEFREE Rett syndrome (RTT) is one of the most common causes of intellectual and developmental disabilities in girls, and is caused by mutations in the gene encoding methyl-CpG binding protein 2 (MECP2). 31542590 2019
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 AlteredExpression group BEFREE In humans, overexpression of MECP2 can cause a severe developmental disorder known as MECP2 duplication syndrome. 31133783 2019
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 GeneticVariation group BEFREE MeCP2 mutations are associated with a spectrum of neuro-developmental disorders that vary depending on the patient gender, most notably Rett Syndrome. 29540297 2018
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 GeneticVariation group BEFREE Methyl-CpG-binding protein 2 (MECP2) deleterious variants, which are responsible for Rett syndrome in girls, are involved in a wide spectrum of developmental disabilities in males. 28230711 2017
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 Biomarker group BEFREE Numerous mutations in DNMTs, TETs and MeCP2 have been identified in cancer and developmental disorders, highlighting the importance of the DNA methylation machinery in human development and physiology. 25942534 2015
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 GeneticVariation group BEFREE The FOXG1 gene was sequenced in 210 patients, including 129 patients with unexplained developmental disorders and 81 MECP2 mutation negative individuals. 21441262 2011
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 Biomarker group BEFREE MeCP2 is a CpG methyl binding protein which has been associated with a number of cancers and developmental disorders, particularly Rett syndrome. 21731748 2011
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 Biomarker group CTD_human A novel MECP2 mutation in a boy with neonatal encephalopathy and facial dysmorphism. 19559301 2009
Entrez Id: 4204
Gene Symbol: MECP2
MECP2
0.380 GeneticVariation group BEFREE Mutations in MECP2 gene account for approximately 80% of cases of Rett syndrome (RTT), an X-linked severe developmental disorder affecting young girls, as well as for most cases of Preserved Speech Variant (PSV), a mild RTT variant in which autistic behavior is common. 12707946 2003
Entrez Id: 9739
Gene Symbol: SETD1A
SETD1A
0.320 GeneticVariation group BEFREE Mutations of SETD1A have been implicated in schizophrenia and developmental disorders, so we examined the role of the four mutations (R913C, Q269R, G1369R, and R1392H) in neural development. 31197650 2019
Entrez Id: 9739
Gene Symbol: SETD1A
SETD1A
0.320 Biomarker group GENOMICS_ENGLAND We further identified four SETD1A LoF carriers among 4,281 children with severe developmental disorders and two more carriers in an independent sample of 5,720 Finnish exomes, both with notable neuropsychiatric phenotypes. 26974950 2016
Entrez Id: 9739
Gene Symbol: SETD1A
SETD1A
0.320 GeneticVariation group BEFREE Rare loss-of-function variants in SETD1A are associated with schizophrenia and developmental disorders. 26974950 2016
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.320 GeneticVariation group BEFREE Therefore, we think it is crucial to look for mutations in the gene SHANK3 in patients diagnosed for childhood disintegrative disorder or any developmental disorder with a regressive pattern involving social and communicative skills as well as cognitive and instinctual functions, with onset around 3 years. 26489495 2015
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.320 GeneticVariation group BEFREE Haploinsufficiency of the SHANK3 gene causes a developmental disorder, 22q13.3 deletion syndrome (known as Phelan-McDermid syndrome), that is characterized by severe expressive language and speech delay, hypotonia, global developmental delay, and autistic behavior. 22749736 2013
Entrez Id: 85358
Gene Symbol: SHANK3
SHANK3
0.320 Biomarker group CTD_human Identification of a recurrent breakpoint within the SHANK3 gene in the 22q13.3 deletion syndrome. 16284256 2006
Entrez Id: 6535
Gene Symbol: SLC6A8
SLC6A8
0.310 GeneticVariation group BEFREE Urine screening for patients with developmental disabilities detected a patient with creatine transporter deficiency due to a novel missense mutation in SLC6A8. 24045174 2014
Entrez Id: 81704
Gene Symbol: DOCK8
DOCK8
0.310 Biomarker group BEFREE Dedicator of cytokinesis 8 is disrupted in two patients with mental retardation and developmental disabilities. 18060736 2008
Entrez Id: 81704
Gene Symbol: DOCK8
DOCK8
0.310 Biomarker group CTD_human Dedicator of cytokinesis 8 is disrupted in two patients with mental retardation and developmental disabilities. 18060736 2008
Entrez Id: 6535
Gene Symbol: SLC6A8
SLC6A8
0.310 Biomarker group CTD_human X-linked creatine-transporter gene (SLC6A8) defect: a new creatine-deficiency syndrome. 11326334 2001
Entrez Id: 547
Gene Symbol: KIF1A
KIF1A
0.300 Biomarker group CTD_human Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity. 30559488 2019