Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 8647
Gene Symbol: ABCB11
ABCB11
0.600 GeneticVariation disease BEFREE Diagnosis of BSEP/ABCB11 mutations in Asian patients with cholestasis using denaturing high performance liquid chromatography. 18692205 2008
Entrez Id: 8647
Gene Symbol: ABCB11
ABCB11
0.600 GeneticVariation disease BEFREE Progressive familial intrahepatic cholestasis type 2 (PFIC2) is a severe autosomal recessive liver disorder of childhood that can cause cholestasis and progress to end-stage liver disease. 19845854 2010
Entrez Id: 3479
Gene Symbol: IGF1
IGF1
0.510 GeneticVariation disease BEFREE The H153N mutant-specific repression of HNF-1alpha and HNF-1beta transactivity in human IGF-I and MRP2 promoters might explain the case-specific clinical features of growth retardation and cholestasis observed only in early infancy. 17210751 2007
Entrez Id: 1593
Gene Symbol: CYP27A1
CYP27A1
0.420 GeneticVariation disease BEFREE Mutation in the sterol 27-hydroxylase gene associated with fatal cholestasis in infancy. 15795599 2005
Entrez Id: 5443
Gene Symbol: POMC
POMC
0.420 GeneticVariation disease BEFREE We identified a novel heterozygous nonsense mutation (c.2764T>C, Glu922Ter) in a case of PSIS without HPE who presented with neonatal hypoglycemia and cholestasis associated with GH, TSH, and ACTH deficiencies. 26529631 2016
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.340 GeneticVariation disease BEFREE Hepatoprotective potentials of S-adenosylmethionine and selenomethionine were estimated based on the changes of serum liver damage parameters (aminotransferases, alkaline phosphatase, gamma-glutamyltranspeptidase and lactate dehydrogenase activity, and bilirubin concentration), tissue oxidative [xanthine oxidase (XO) and catalase activity, thiobarbituric acid reactive substances (TBARS) levels] and inflammatory [tumor necrosis factor-alfa (TNF-α) concentration] parameters, and morphological liver tissue alterations that follow cholestasis. 30879149 2019
Entrez Id: 4645
Gene Symbol: MYO5B
MYO5B
0.330 GeneticVariation disease BEFREE MYO5B mutations cause cholestasis with normal serum gamma-glutamyl transferase activity in children without microvillous inclusion disease. 27532546 2017
Entrez Id: 4645
Gene Symbol: MYO5B
MYO5B
0.330 GeneticVariation disease BEFREE Our aim was to investigate the mechanisms by which MYO5B mutations affect hepatic biliary function and lead to cholestasis in MVID patients. 24375397 2014
Entrez Id: 5265
Gene Symbol: SERPINA1
SERPINA1
0.320 GeneticVariation disease BEFREE We believe that genetic alterations of alpha-1 antitrypsin and P-glycoprotein, either alone or in association with known pathogenetic mechanisms, may explain the onset of danazol induced cholestasis and justify the difference in its varying duration and intensity. 9360432 1997
Entrez Id: 5265
Gene Symbol: SERPINA1
SERPINA1
0.320 GeneticVariation disease BEFREE DNA samples were obtained from 51 subjects with cholestasis of undefined etiology and surveyed for mutations in the genes SERPINA1, JAG1, ATP8B1, ABCB11, and ABCB4 by a high-throughput gene chip. 20683201 2010
Entrez Id: 1716
Gene Symbol: DGUOK
DGUOK
0.310 GeneticVariation disease BEFREE We identified pathogenic MPV17 and DGUOK mutations in 11 infants (6 females) representing 2.5% of the 450 cases of infantile cholestasis and 22% of the 50 cases of infantile liver failure referred to our center during the study period. 24321534 2014
Entrez Id: 4358
Gene Symbol: MPV17
MPV17
0.310 GeneticVariation disease BEFREE We identified pathogenic MPV17 and DGUOK mutations in 11 infants (6 females) representing 2.5% of the 450 cases of infantile cholestasis and 22% of the 50 cases of infantile liver failure referred to our center during the study period. 24321534 2014
Entrez Id: 6928
Gene Symbol: HNF1B
HNF1B
0.310 GeneticVariation disease BEFREE We conclude that to detect HNF1B variants, neonates with cholestasis should be checked for the presence of renal cysts, with special focus on those who are born small for their gestational age. 25741167 2015
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE First description of ABCB4 gene deletions in familial low phospholipid-associated cholelithiasis and oral contraceptives-induced cholestasis. 21989363 2012
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE A mutation in the canalicular phospholipid transporter gene, ABCB4, is associated with cholestasis, ductopenia, and cirrhosis in adults. 18781607 2008
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Those patients presenting high GGT-PFIC with early onset cholestasis but without MDR3 mutation probably had inheritable disorders remaining to be clarified. 11420418 2001
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE In summary, our data support a role of ABCB11 and ABCB4 mutations and polymorphisms in drug-induced cholestasis. 17264802 2007
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Bland canalicular cholestasis is the prototypic change but it is now clear that some gene mutations, particularly in ABCB4 (encoding MDR3), can cause other patterns that include early cholesterol calculus formation, bile duct injury and disappearance, ductular reactions mimicking large duct obstruction and, in rare cases, progressive fibrosis. 31669892 2020
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Because phospholipids are a carrier and a solvent of cholesterol in hepatic bile, we hypothesized that a defect in the MDR3 gene could be the genetic basis for peculiar forms of cholesterol gallstone disease, in particular those associated with symptoms and cholestasis without evident common bile duct stone. 11313316 2001
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Variations of the ABCB4 and ABCB11 genes affect the composition of bile and are associated with cholestasis and cholelithiasis. 25323205 2015
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Our data further support an involvement of MDR3 genetic variation in the pathogenesis of ICP, whereas analysis of BSEP sequence variation indicates that this gene is probably less important for the development of pregnancy-associated cholestasis. 15077010 2004
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Our aim was to evaluate the impact of ABCB4 mutations on clinical expression of cholestasis in adult patients. 26324191 2016
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE Thirty-three patients with unexplained cholestasis despite a thorough clinical work-up were examined for sequence variations in the coding regions of the ABCB4, ABCB11, ABCC2, ABCG5, ATP8B1, JAG1, NOTCH2, and UGT1A1 genes and the promoter region of UGT1A1 by massive parallel sequencing of DNA extracted from whole blood. 29304564 2018
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE MDR3 R652G is negatively correlated with idiopathic infant cholestasis. 19998509 2009
Entrez Id: 5244
Gene Symbol: ABCB4
ABCB4
0.300 GeneticVariation disease BEFREE ABCB4(S320F) homozygosity, with half the normal level of ABCB4, is the tipping point between more benign and potentially fatal cholestasis and makes these patients more acutely sensitive to environmental effects. 24806754 2014