Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 80025
Gene Symbol: PANK2
PANK2
0.110 GeneticVariation phenotype BEFREE A deleterious homozygous four-nucleotide deletion causing frameshift deletion in PANK2 gene (c.1426_1429delATGA, p.M476 fs) was identified in an 8 years old girl with dystonia, bone fracture, muscle rigidity, abnormal movement, lack of coordination and chorea. 28821231 2017
Entrez Id: 8291
Gene Symbol: DYSF
DYSF
0.110 AlteredExpression phenotype BEFREE It is suggested that the chorea may be associated with the altered expression of the brain isoform of dysferlin. 16817213 2006
Entrez Id: 203228
Gene Symbol: C9orf72
C9orf72
0.110 GeneticVariation phenotype BEFREE In continuation with this observation, we analyzed a small cohort of 39 patients with HD phenocopy syndrome and detected the C9orf72 expansion in one female patient (2.6%) with two-year lasting mild generalized chorea and severe oro-bucco-lingual dyskinesia, who complained on forgetfullness (neuropsychological testing revealed dysexecutive syndrome with preserved episodic memory and recognition), unexplainable fears and increased appetite. 25034271 2014
Entrez Id: 2395
Gene Symbol: FXN
FXN
0.110 GeneticVariation phenotype BEFREE This is the first report of chorea in patients confirmed to have the FA genetic abnormality and broadens further the clinical phenotype associated with the FA genotype. 9539351 1998
Entrez Id: 3736
Gene Symbol: KCNA1
KCNA1
0.110 GeneticVariation phenotype BEFREE We excluded linkage to 11 regions containing genes associated with chorea and myokymia: 1) the Huntington disease gene on chromosome 4p; 2) the paroxysmal dystonic choreoathetosis gene at 2q34; 3) the dentatorubral-pallidoluysian atrophy gene at 12p13; 4) the choreoathetosis/spasticity disease locus on 1p that lies in a region containing a cluster of potassium (K+) channel genes; 5) the episodic ataxia type 1 (EA1) locus on 12p that contains the KCNA1 gene and two other voltage-gated K+ channel genes, KCNA5 and KCNA6; 6) the chorea-acanthocytosis locus on 9q21; 7) the Huntington-like syndrome on 20p; 8) the paroxysmal kinesigenic dyskinesia locus on 16p11.2-q11.2; 9) the benign hereditary chorea locus on 14q; 10) the SCA type 5 locus on chromosome 11; and 11) the chromosome 19 region that contains several ion channels and the CACNA1A gene, a brain-specific P/Q-type calcium channel gene associated with ataxia and hemiplegic migraine. 11310626 2001
Entrez Id: 2512
Gene Symbol: FTL
FTL
0.110 GeneticVariation phenotype BEFREE Mutations in the ferritin light chain cause an adult-onset autosomal-dominant choreiform movement disorder termed neuroferritinopathy. 21496576 2011
Entrez Id: 54209
Gene Symbol: TREM2
TREM2
0.110 GeneticVariation phenotype BEFREE Frontotemporal Dementia and Chorea Associated with a Compound Heterozygous TREM2 Mutation. 29578490 2018
Entrez Id: 6571
Gene Symbol: SLC18A2
SLC18A2
0.040 Biomarker phenotype BEFREE Expert commentary: Inhibitors of presynaptic vesicular monoamine transporter type 2 (VMAT2) that cause striatal dopamine depletion, such as tetrabenazine, deutetrabenazine, and valbenazine, are considered the treatment of choice in patients with chorea. 29120264 2018
Entrez Id: 6571
Gene Symbol: SLC18A2
SLC18A2
0.040 Biomarker phenotype BEFREE Oral deutetrabenazine (Austedo™), a reversible inhibitor of vesicular monoamine transporter type 2 (VMAT2) that is structurally related to tetrabenazine is approved for the treatment of chorea symptoms associated with Huntington's disease (HD). 29080203 2017
Entrez Id: 6571
Gene Symbol: SLC18A2
SLC18A2
0.040 Biomarker phenotype BEFREE Areas covered: Deutetrabenazine is the first deuterated drug and second drug after tetrabenazine, the classic vesicular monoamine transporter type 2 (VMAT2) inhibitor, to receive approval for the treatment of chorea associated with HD. 29996061 2018
Entrez Id: 6571
Gene Symbol: SLC18A2
SLC18A2
0.040 Biomarker phenotype BEFREE The recent development of selective vesicular monoamine transporter blocking agents has allowed for targeted chorea management with minimal side effects. 30255459 2018
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.020 Biomarker phenotype BEFREE The field of movement disorders with neuronal antibodies keeps expanding with the discovery for example of antibodies against leucine rich glioma inactivated protein 1 (LGI1) and contactin associated protein 2 (Caspr2) in chorea, or antibodies targeting ARHGAP26- or Na/K ATPase alpha 3 subunit (ATP1A3) in cerebellar ataxia. 27262149 2016
Entrez Id: 9211
Gene Symbol: LGI1
LGI1
0.020 GeneticVariation phenotype BEFREE Clinical manifestations included faciobrachial dystonic seizures (FBDS) in 11 of 35 (31.4%) patients, all with LGI1 antibodies; a combination of gait instability, brainstem dysfunction, and sleep disorder associated with IgLON5 antibodies in 10 (28.6%); acute confusion, memory loss, and behavioral changes suggesting autoimmune encephalitis (AE) in 9 (25.7%; 2 patients with AMPAR, 2 with NMDAR, 2 with GABAbR, 2 with LGI1, and 1 with CASPR2 antibodies); and rapidly progressive cognitive deterioration in 5 (14.3%; 3 patients with IgLON5 antibodies, 1 with chorea; 1 with DPPX antibody-associated cerebellar ataxia and arm rigidity; and 1 with CASPR2 antibodies). 28878050 2017
Entrez Id: 9211
Gene Symbol: LGI1
LGI1
0.020 Biomarker phenotype BEFREE The field of movement disorders with neuronal antibodies keeps expanding with the discovery for example of antibodies against leucine rich glioma inactivated protein 1 (LGI1) and contactin associated protein 2 (Caspr2) in chorea, or antibodies targeting ARHGAP26- or Na/K ATPase alpha 3 subunit (ATP1A3) in cerebellar ataxia. 27262149 2016
Entrez Id: 26047
Gene Symbol: CNTNAP2
CNTNAP2
0.020 Biomarker phenotype BEFREE Clinical manifestations included faciobrachial dystonic seizures (FBDS) in 11 of 35 (31.4%) patients, all with LGI1 antibodies; a combination of gait instability, brainstem dysfunction, and sleep disorder associated with IgLON5 antibodies in 10 (28.6%); acute confusion, memory loss, and behavioral changes suggesting autoimmune encephalitis (AE) in 9 (25.7%; 2 patients with AMPAR, 2 with NMDAR, 2 with GABAbR, 2 with LGI1, and 1 with CASPR2 antibodies); and rapidly progressive cognitive deterioration in 5 (14.3%; 3 patients with IgLON5 antibodies, 1 with chorea; 1 with DPPX antibody-associated cerebellar ataxia and arm rigidity; and 1 with CASPR2 antibodies). 28878050 2017
Entrez Id: 6513
Gene Symbol: SLC2A1
SLC2A1
0.010 GeneticVariation phenotype BEFREE Childhood chorea with cerebral hypotrophy: a treatable GLUT1 energy failure syndrome. 19901175 2009
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.010 GeneticVariation phenotype BEFREE The frequencies of the HLA-DRB1 and HLA-DQB1 alleles in patients with pure chorea were not significantly different from those observed in controls. 10751115 2000
Entrez Id: 54840
Gene Symbol: APTX
APTX
0.010 Biomarker phenotype BEFREE AOA1 is associated with oculomotor apraxia, severe sensorimotor neuropathy, choreiform movements, cognitive impairment, and cerebellar atrophy at an early age. 16700949 2006
Entrez Id: 8910
Gene Symbol: SGCE
SGCE
0.010 GeneticVariation phenotype BEFREE The mutually exclusive appearance of lightning-like myoclonic jerks triggered by action in SGCE mutation carriers and of continuous chorea of all limbs in TITF-1 mutation carriers phenotypically discriminated both genetic disorders. 17702043 2007
Entrez Id: 2254
Gene Symbol: FGF9
FGF9
0.010 GeneticVariation phenotype BEFREE We identified a homozygous mutation affecting the GAF-B domain of the 3',5'-cyclic nucleotide phosphodiesterase PDE2A gene (c.1439A>G; p.Asp480Gly) as the candidate novel genetic cause of chorea in the proband. 29392776 2018
Entrez Id: 56896
Gene Symbol: DPYSL5
DPYSL5
0.010 GeneticVariation phenotype BEFREE These include anti-N-methyl-d-aspartate receptor (NMDAR) encephalitis which may present with orolingual facial dyskinesia and stereotyped movements, CRMP-5 IgG presenting with chorea, anti-Yo paraneoplastic cerebellar degeneration presenting with ataxia, anti-VGKC complex (Caspr2 antibodies) neuromyotonia, opsoclonus-myoclonus-ataxia syndrome, and muscle rigidity and episodic spasms (amphiphysin, glutamic acid decarboxylase, glycine receptor, GABA(A)-receptor associated protein antibodies) in stiff-person syndrome. 29097081 2017
Entrez Id: 1182
Gene Symbol: CLCN3
CLCN3
0.010 GeneticVariation phenotype BEFREE Considering that chorea in this patient might be due to the disruption of a gene at either of the 4p15.32 or 4q33 breakpoints, CLCN3 was considered as a candidate gene. 9521585 1998
Entrez Id: 174
Gene Symbol: AFP
AFP
0.010 Biomarker phenotype BEFREE Four strains demonstrated RDS that was less pronounced than in most AT cells: one was from a patient with Nijmegen breakage syndrome, one was from a patient without ataxia but with choreiform movement disorder, telangiectasia, and elevated concentrations of alpha-fetoprotein in the blood, and two were from AT patients. 2722185 1989
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.010 GeneticVariation phenotype BEFREE The frequencies of the HLA-DRB1 and HLA-DQB1 alleles in patients with pure chorea were not significantly different from those observed in controls. 10751115 2000
Entrez Id: 23583
Gene Symbol: SMUG1
SMUG1
0.010 Biomarker phenotype BEFREE Glucose Hypermetabolism in Contralateral Basal Ganglia Demonstrated by Serial FDG PET/CT Scans in a Patient With SLE Chorea. 27819860 2017