Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5395
Gene Symbol: PMS2
PMS2
0.110 GeneticVariation phenotype LHGDN A new cancer syndrome caused by biallelic mutations in the mismatch repair genes, including PMS2, is now emerging and is characterized by café-au-lait macules, colonic polyps and a distinctive tumor spectrum. 18273873 2008
Entrez Id: 5395
Gene Symbol: PMS2
PMS2
0.110 GeneticVariation phenotype CLINVAR
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.050 GeneticVariation phenotype BEFREE CDX2 heterozygous mutant mice develop colonic polyps, and loss of CDX2 expression is seen in a subset of colon carcinomas in humans. 20699370 2010
Entrez Id: 1045
Gene Symbol: CDX2
CDX2
0.050 GeneticVariation phenotype BEFREE Inactivation of one Cdx2 allele predisposes mice to develop colon polyps, and loss of CDX2 expression is a feature of some poorly differentiated colon carcinomas in humans. 12404231 2002
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.050 GeneticVariation phenotype BEFREE This is the first PPARG germline mutation associated with dyslipidemia and colonic polyp formation that can progress to full-blown adenocarcinoma. 20123124 2010
Entrez Id: 324
Gene Symbol: APC
APC
0.050 GeneticVariation phenotype BEFREE Whereas the number of colonic polyps has been linked to the APC gene mutation, possible genotype-phenotype correlations largely remain to be defined for the extracolonic manifestations. 19036155 2008
Entrez Id: 324
Gene Symbol: APC
APC
0.050 GeneticVariation phenotype BEFREE We have previously suggested that the APC protein might modulate the frequency of mutations, such as loss of heterozygosity (LOH), necessary for colon polyp formation. 9843214 1998
Entrez Id: 5468
Gene Symbol: PPARG
PPARG
0.050 GeneticVariation phenotype BEFREE In this study the expression and mutations of the PPARgamma gene in the colonic polyps and mucosa outside polyps were investigated in 10 acromegalic and 17 non-acromegalic patients. 15008240 2003
Entrez Id: 324
Gene Symbol: APC
APC
0.050 GeneticVariation phenotype BEFREE From this descriptive study, it seems that the short-term risk for colonic polyps in I1307K APC mutation is low, primarily affecting patients with previously diagnosed colon tumors. 15733272 2005
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 GeneticVariation phenotype BEFREE Our project was aimed at determining the existence of distinct molecular subtypes in 159 non-microsatellite-instable colon polyps and their correlation with histology and dysplasia, using allelotyping, MGMT promoter gene methylation status, and K-RAS mutation analyses. 21238786 2011
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.030 GeneticVariation phenotype BEFREE We conclude that it is important to analyze p53 mutations in colonic polyps, especially when the cut end of the polyp is difficult to evaluate histologically, in order to predict recurrence. 11480796 2001
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.030 GeneticVariation phenotype BEFREE The aim of this study was to investigate BRAF mutation and DNA methylation in colorectal serrated polyps and the right colon.Between 2005 and 2013, 146 colon polyps (47 tubular adenomas [TAs], 53 traditional serrated adenomas [TSAs], 17 sessile serrated adenomas/polyps [SSAs], and 29 hyperplastic polyps in the proximal colon [PHPs]) were collected from patients. 27930579 2016
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.030 GeneticVariation phenotype BEFREE We concluded that high frequency of 84F allele in the group of patients may suggest the role of the MGMT variant in colon polyps etiology. 25443735 2014
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.030 GeneticVariation phenotype BEFREE KRAS and BRAF somatic mutations in colonic polyps and the risk of metachronous neoplasia. 28953955 2017
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.020 GeneticVariation phenotype BEFREE Our project was aimed at determining the existence of distinct molecular subtypes in 159 non-microsatellite-instable colon polyps and their correlation with histology and dysplasia, using allelotyping, MGMT promoter gene methylation status, and K-RAS mutation analyses. 21238786 2011
Entrez Id: 3845
Gene Symbol: KRAS
KRAS
0.020 GeneticVariation phenotype BEFREE KRAS and BRAF somatic mutations in colonic polyps and the risk of metachronous neoplasia. 28953955 2017
Entrez Id: 27022
Gene Symbol: FOXD3
FOXD3
0.010 GeneticVariation phenotype BEFREE Genetic Biopsy for Prediction of Surveillance Intervals after Endoscopic Resection of Colonic Polyps: Results of the GENESIS Study. 29511559 2018
Entrez Id: 2944
Gene Symbol: GSTM1
GSTM1
0.010 GeneticVariation phenotype BEFREE Polymorphism of GSTM1 gene in patients with colorectal cancer and colonic polyps. 10445390 1999
Entrez Id: 22943
Gene Symbol: DKK1
DKK1
0.010 GeneticVariation phenotype BEFREE Consequently, we evaluated serum 25(OH) D levels, vitamin D receptor (VDR) polymorphisms and the methylation status of the tumor suppressor gene dickkopf homolog 1 (DKK1) as risk factors for colon polyp in this population. 22022386 2011
Entrez Id: 4968
Gene Symbol: OGG1
OGG1
0.010 GeneticVariation phenotype BEFREE The aim of the study was to compare the genotypic distribution of OGG1 Ser326Cys between acromegaly patients and nonacromegalic subjects and to explore whether this polymorphism is associated with a colon polyp risk and abnormal glucose tolerance. 23368532 2013
Entrez Id: 7015
Gene Symbol: TERT
TERT
0.010 GeneticVariation phenotype BEFREE None of the investigated TERT SNPs (rs2736122, rs2853676, rs2735940, rs2736098, rs2075786, rs2736100, rs4975605) were found to be associated with risk of CRC nor colonic polyps. 22495810 2012
Entrez Id: 4595
Gene Symbol: MUTYH
MUTYH
0.010 GeneticVariation phenotype LHGDN We report a case of siblings with identical germline mutations in the MYH gene, one of whom developed a locally advanced colon adenocarcinoma with few other adenomatous lesions, whereas the other had numerous benign colonic polyps. 18186383 2007
Entrez Id: 196
Gene Symbol: AHR
AHR
0.010 GeneticVariation phenotype BEFREE In acromegaly, GSTP1 gene methylation associates with resistance to SSA treatment, especially in patients carrying also the AHR rs2066853 variant, and with increased prevalence of colonic polyps and diabetes mellitus. 30488289 2019
Entrez Id: 7421
Gene Symbol: VDR
VDR
0.010 GeneticVariation phenotype BEFREE Consequently, we evaluated serum 25(OH) D levels, vitamin D receptor (VDR) polymorphisms and the methylation status of the tumor suppressor gene dickkopf homolog 1 (DKK1) as risk factors for colon polyp in this population. 22022386 2011
Entrez Id: 26585
Gene Symbol: GREM1
GREM1
0.010 GeneticVariation phenotype BEFREE This finding supports comprehensive testing of the GREM1 regulatory region in families of all ethnicities with multiple colon polyps or colon cancer, and when Lynch syndrome is suspected. 29804199 2019