Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE Seven known genetic defects, including Bruton tyrosine kinase (Btk), CD4OL, and signaling lymphocyte activation molecule-associated protein (SAP) (all X-linked) and inducible costimulator molecule (ICOS), transmembrane activator and calcium-modulator and cytophilin ligand interactor (TACI), B-cell-activating factor of the tumor necrosis family receptor (BAFFR), and CD19 (all autosomal recessive), were found in patients with the phenotype of common variable immunodeficiency (CVID). 18051214 2007
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE Three different classifications, B lymphocyte subpopulations, TNFRSF13B (TACI), TNFRSF13C (BAFF-R), TNFSF13 (APRIL) gene mutations, CTLA-4 and ICOS gene polymorphisms in Turkish patients with common variable immunodeficiency. 22699762 2012
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE Homozygous loss of ICOS is associated with adult-onset common variable immunodeficiency. 12577056 2003
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE Recently, the authors discovered that the homozygous loss of the ICOS in humans presents as common variable immunodeficiency, the most prevalent treated primary immunodeficiency in man. 14612664 2003
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE The discovery of human ICOS deficiency showed that a monogenic disorder could account for the full spectrum of manifestations seen in childhood and adulthood-onset CVID, including autoimmune, inflammatory, and malignant disease complications, as well as recurrent infections. 19426217 2009
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE In addition, the flowcytometric analysis of the inducible costimulator on activated T cells, CD19 and BAFF-R on B cells are valid screening methods for three of the four known genetic defects associated with CVID. 18561200 2008
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.800 GeneticVariation disease BEFREE The candidate gene approach has led to the detection of associations between common variable immunodeficiency (CVID) and mutations in the genes TACI, ICOS, BAFF-R, CD19, CD20, and CD81. 21905497 2011
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE We report the case of a family (mother and her two sons) diagnosed with common variable immunodeficiency 10 due to a mutation in the NFKB2 gene. 31468084 2019
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE Subsequent whole exome sequencing studies have revealed germline heterozygous C-terminal mutations of NFKB2 as a cause of DAVID syndrome or of CVID without clinical hypopituitarism. 28472507 2017
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE Using flow cytometry, we further demonstrated that there was a reduction in B cells (CD19+), switched memory B cells (CD27+IgD-) and T follicular helper (Tfh) cells (both CD4+CXCR5+ and CD4+CXCR5Hi) in a CVID patient with NFKB2/p100Δ19, compared to healthy controls. 24888602 2014
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE Early B cell developmental impairment with progressive B cell deficiency in NFKB2 mutated CVID disease without autoimmunity. 30500415 2019
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE Fatal Enteroviral Encephalitis in a Patient with Common Variable Immunodeficiency Harbouring a Novel Mutation in NFKB2. 30927119 2019
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE In conclusion, pathogenic stop variants in the ARD of NFKB2 can cause 'infection-only' CVID with an abnormal B-cell phenotype and a variable clinical penetrance. 30953794 2019
Entrez Id: 4791
Gene Symbol: NFKB2
NFKB2
0.780 GeneticVariation disease BEFREE NFKB2 mutation in common variable immunodeficiency and isolated adrenocorticotropic hormone deficiency: A case report and review of literature. 27749582 2016
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE TNFRSF13B hemizygosity does not recapitulate autoimmune features of CVID-associated C104R and A181E TNFRSF13B mutations, which likely encode dominant negative products, but instead reveals selective TACI haploinsufficiency at later stages of B-cell development. 26100089 2015
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE Remarkably, we did not find the TNFRSF13B mutation in the third index-child with CVID, despite his hypogammaglobulinaemia and decreased response to unconjugated pneumococcal vaccine. 19210517 2009
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE Our data provide further evidence that TNFRSF13B/TACI alterations are not causative of CVID. 21547394 2011
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE In some patients with common variable immunodeficiency (CVID) and immunoglobulin (Ig) A deficiency (IgAD), tumor necrosis factor (TNF) family receptor transmembrane activator and calcium-modulator and cyclophilin ligand interactor (TACI) gene mutations have been reported. 18204790 2008
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease LHGDN Transmembrane activator and calcium-modulating cyclophilin ligand interactor mutations in common variable immunodeficiency: clinical and immunologic outcomes in heterozygotes. 17983875 2007
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE Of the 6 IgAD patients, 1 had a heterozygous TACI mutation (16.67%), while of the 3 unclassified patients, 1 had a monoallelic TACI mutation (33.3%), but his sibling who also had the same mutation had CVID. 20156508 2010
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE To summarize the recent advancements in common variable immune deficiency (CVID), specifically CVID genetics, clinical discoveries and treatment implications. 23026770 2012
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE We report the case of a man with CVID in association with a heterozygous TACI gene mutation (C104R) who had a highly unusual, invasive, polyclonal CD8+ T-cell lymphoproliferation resulting in massive hepatosplenomegaly and causing renal impairment because of infiltration. 16630947 2006
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE We have replicated an association of CVID to p.C104R in TNFRSF13B and reported the second case of homozygous patient to date. 29867916 2018
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE The hypothesis that the CVID gene predisposes heterozygous female carriers to cancer may be evaluated more easily in the future when the genetic basis for CVID is better understood. 3957001 1986
Entrez Id: 23495
Gene Symbol: TNFRSF13B
TNFRSF13B
0.700 GeneticVariation disease BEFREE Heterozygous mutations in TNFRSF13B are also associated with CVID, whereas the other three genes are purely recessive. 17467261 2007