Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.010 AlteredExpression disease BEFREE Significant higher level of IL-2 was observed in both epithelial and stromal CD. 31756391 2020
Entrez Id: 3565
Gene Symbol: IL4
IL4
0.010 AlteredExpression disease BEFREE IL-4, TGFβ1 and IgE were significantly higher in stromal CD. 31756391 2020
Entrez Id: 3596
Gene Symbol: IL13
IL13
0.010 Biomarker disease BEFREE VCAM, IL-13 and Fractalkine were significantly elevated in epithelial and macular CD. 31756391 2020
Entrez Id: 6403
Gene Symbol: SELP
SELP
0.010 AlteredExpression disease BEFREE IL-1α, IL-8, IL-12, ANG, Eotaxin, MCP1, RANTES, ICAM1, L-selectin and P-selectin were significantly higher in epithelial CD. 31756391 2020
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 AlteredExpression disease BEFREE IL-1α, IL-8, IL-12, ANG, Eotaxin, MCP1, RANTES, ICAM1, L-selectin and P-selectin were significantly higher in epithelial CD. 31756391 2020
Entrez Id: 6404
Gene Symbol: SELPLG
SELPLG
0.010 Biomarker disease BEFREE Close collaboration between the ophthalmologist and the internist will facilitate a more precise diagnosis of ocular involvement in amyloidosis and allow the multidisciplinary management of these patients.<b>Abbreviations:</b> CD: corneal dystrophy; CLA: corneal lattice amyloidosis; CNS: central nervous system; CT: computed tomography; FAP: familial amyloidotic polyneuropathy; GDLCD: gelatinous drop-like corneal dystrophy; GLN: gelsolin; LCD: lattice corneal dystrophy; MRI: magnetic resonance imaging; OLT: orthotopic liver transplantation; TEM: transmission electron microscopy; TGFBI: transforming growth factor β induced; TTR: transthyretin. 31829761 2020
Entrez Id: 5654
Gene Symbol: HTRA1
HTRA1
0.010 Biomarker disease BEFREE In summary, our results indicate that TGFBIp is an HtrA1 substrate and that some mutations in the gene encoding TGFBIp cause aberrant HtrA1-mediated processing that results in amyloidogenesis in corneal dystrophies. 31197037 2019
Entrez Id: 7476
Gene Symbol: WNT7A
WNT7A
0.010 Biomarker disease BEFREE Wnt7a is implicated in homeostasis maintenance of skeletal muscle, cartilage, cornea and hair follicle, and Wnt7a treatment may be potentially applied in skeletal muscle dystrophy, corneal damage, wound repair, and hair follicle regeneration.Wnt7a plays dual roles in human tumors. 31271226 2019
Entrez Id: 7702
Gene Symbol: ZNF143
ZNF143
0.010 GeneticVariation disease BEFREE Here, we report the identification of a novel ZNF143 heterozygous missense mutation in three individuals of the same family with clinical and pathological features that are consistent with endothelial CD. 31390831 2019
Entrez Id: 7042
Gene Symbol: TGFB2
TGFB2
0.010 Biomarker disease BEFREE These included FBN1, ADAMTS2 and TGFB2 which associate with connective tissue disorders (Marfan, Ehlers-Danlos and Loeys-Dietz syndromes), and the LUM-DCN-KERA gene complex involved in myopia, corneal dystrophies and cornea plana. 29760442 2018
Entrez Id: 6469
Gene Symbol: SHH
SHH
0.010 GeneticVariation disease BEFREE In addition to the identification of known recurrent CNVs, such as deletions 6qter, 18q21 (including TCF4), 1q43q44, 17p13.3, 14q12, 3q13, 3p26, and 3q26 (including SOX2), our analysis allowed us to refine the 2 known critical regions associated with 8q21.1 deletion and 19p13.1 duplication relevant for corpus callosum abnormality; report a novel 10p12 deletion including ZEB1 recently implicated in corpus callosum abnormality with corneal dystrophy; and) report a novel pathogenic 7q36 duplication encompassing SHH. 28284480 2017
Entrez Id: 55737
Gene Symbol: VPS35
VPS35
0.010 Biomarker disease BEFREE Taken together, these results suggest that SLC4A11 appears to be a Vps35/retromer cargo, and Vps35-regulation of SLC4A11 trafficking may underlie Vps35/retromer regulation of corneal dystrophy. 28934248 2017
Entrez Id: 6657
Gene Symbol: SOX2
SOX2
0.010 GeneticVariation disease BEFREE In addition to the identification of known recurrent CNVs, such as deletions 6qter, 18q21 (including TCF4), 1q43q44, 17p13.3, 14q12, 3q13, 3p26, and 3q26 (including SOX2), our analysis allowed us to refine the 2 known critical regions associated with 8q21.1 deletion and 19p13.1 duplication relevant for corpus callosum abnormality; report a novel 10p12 deletion including ZEB1 recently implicated in corpus callosum abnormality with corneal dystrophy; and) report a novel pathogenic 7q36 duplication encompassing SHH. 28284480 2017
Entrez Id: 5476
Gene Symbol: CTSA
CTSA
0.010 Biomarker disease BEFREE Mice, double deficient in lysosomal serine carboxypeptidases Scpep1 and Cathepsin A develop the hyperproliferative vesicular corneal dystrophy and hypertrophic skin thickenings. 28234994 2017
Entrez Id: 5793
Gene Symbol: PTPRG
PTPRG
0.010 GeneticVariation disease BEFREE In the present study, we screened several reported SNPs (rs2286812, rs17595731 and rs613827 in TCF4; rs7640737 and rs2292245 in PTPRG) in FED and non-Fuchs' patients with corneal dystrophies of southern Chinese. 23758498 2014
Entrez Id: 8785
Gene Symbol: MATN4
MATN4
0.010 AlteredExpression disease BEFREE Fibrillin-2, tenascin-C, matrilin-2, and matrilin-4 are strongly expressed in the epithelium of human granular and lattice type I corneal dystrophies. 22876117 2012
Entrez Id: 2639
Gene Symbol: GCDH
GCDH
0.010 GeneticVariation disease BEFREE Five mutations of TGFBI were identified in 21 families with CDs, including one novel small deletion mutation, c.delta1838-1849 (p.Delta613-616VAEP), responsible for one variant lattice CD (LCD) family and 4 known mutations, R555W mutation for 10 granular cornea dystrophy type I (GCD1) families, R124H for 5 GCD type II (GCD2), R124C for 4 LCD1, and H626R for one variant LCD. 20664689 2010
Entrez Id: 390226
Gene Symbol: GUCY2EP
GUCY2EP
0.010 GeneticVariation disease BEFREE Five mutations of TGFBI were identified in 21 families with CDs, including one novel small deletion mutation, c.delta1838-1849 (p.Delta613-616VAEP), responsible for one variant lattice CD (LCD) family and 4 known mutations, R555W mutation for 10 granular cornea dystrophy type I (GCD1) families, R124H for 5 GCD type II (GCD2), R124C for 4 LCD1, and H626R for one variant LCD. 20664689 2010
Entrez Id: 10631
Gene Symbol: POSTN
POSTN
0.010 GeneticVariation disease BEFREE The corneal dystrophy-associated R124H mutation in TGFBI severely impairs interaction with periostin in vivo. 19478074 2009
Entrez Id: 1295
Gene Symbol: COL8A1
COL8A1
0.010 GeneticVariation disease BEFREE The absence of pathogenic mutations identified in the COL8A1 or COL8A2 genes in affected members of 15 pedigrees with familial FECD indicates that other genetic factors are involved in the development of this autosomal dominant corneal dystrophy. 16936088 2006
Entrez Id: 65057
Gene Symbol: ACD
ACD
0.010 GeneticVariation disease BEFREE Diagnoses included Thiel-Benhke CD (TBCD/R555Q) (13 eyes), classic granular CD (CGCD/R555W) (28 eyes), superficial variant of granular dystrophy (SVGD/R124 l) (27 eyes), lattice CD type I (LCDI/R124C) (20 eyes), Avellino CD (ACD/R124H) (2 eyes), H626R-lattice dystrophy (LCD/H626R) (6 eyes), and two novel dystrophies: a French variant of granular dystrophy (FVGD/R124 l+DT125-DE126) (9 eyes) and a French lattice CD type IIIA (LCDIIIA/A546T) (5 eyes). 11927442 2002
Entrez Id: 6904
Gene Symbol: TBCD
TBCD
0.010 GeneticVariation disease BEFREE Diagnoses included Thiel-Benhke CD (TBCD/R555Q) (13 eyes), classic granular CD (CGCD/R555W) (28 eyes), superficial variant of granular dystrophy (SVGD/R124 l) (27 eyes), lattice CD type I (LCDI/R124C) (20 eyes), Avellino CD (ACD/R124H) (2 eyes), H626R-lattice dystrophy (LCD/H626R) (6 eyes), and two novel dystrophies: a French variant of granular dystrophy (FVGD/R124 l+DT125-DE126) (9 eyes) and a French lattice CD type IIIA (LCDIIIA/A546T) (5 eyes). 11927442 2002
Entrez Id: 412
Gene Symbol: STS
STS
0.010 Biomarker disease BEFREE KRT12, MSS1, GLA, and ARSC1) have been identified in 15 corneal dystrophies. 10612512 1999
Entrez Id: 6678
Gene Symbol: SPARC
SPARC
0.010 GeneticVariation disease BEFREE Delineation of a 1-cM region on distal 5q containing the locus for corneal dystrophies Groenouw type I and lattice type I and exclusion of the candidate genes SPARC and LOX. 8875187 1996
Entrez Id: 4015
Gene Symbol: LOX
LOX
0.010 GeneticVariation disease BEFREE Delineation of a 1-cM region on distal 5q containing the locus for corneal dystrophies Groenouw type I and lattice type I and exclusion of the candidate genes SPARC and LOX. 8875187 1996