Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.210 Biomarker disease RGD A novel small molecule CFTR inhibitor attenuates HCO3- secretion and duodenal ulcer formation in rats. 15905414 2005
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.210 Biomarker disease RGD Using a rat model, we have demonstrated that Candida infection can delay the wound healing process of duodenal ulcers by means of a low expression of VEGF-A and PCNA. 18622701 2008
Entrez Id: 1080
Gene Symbol: CFTR
CFTR
0.210 AlteredExpression disease BEFREE H. pylori infection downregulates duodenal epithelial cellular CFTR and SLC26A6 expressions through TGFβ-mediated P38 MAPK signaling pathway, which contributes to further elucidating the pathogenesis of H. pylori-associated duodenal ulcer. 30119655 2018
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.210 GeneticVariation disease BEFREE The G1612A(rs10434) and C936T(rs3025039) polymorphisms in the 3' untranslated region (3'-UTR) of VEGF gene were genotyped in a total of 844 subjects including 385 GC, 143 ulcer including 98 gastric ulcer (GU), 45 duodenal ulcer (DU), and 316 nonulcer subjects. 19496079 2009
Entrez Id: 7037
Gene Symbol: TFRC
TFRC
0.200 Biomarker disease RGD Role of iron in the pathogenesis of cysteamine-induced duodenal ulceration in rats. 19342511 2009
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.200 Biomarker disease RGD Thus, STAT3 represents an important new molecular mechanism in experimental duodenal ulceration. 24385009 2014
Entrez Id: 4891
Gene Symbol: SLC11A2
SLC11A2
0.200 Biomarker disease RGD Role of iron in the pathogenesis of cysteamine-induced duodenal ulceration in rats. 19342511 2009
Entrez Id: 48
Gene Symbol: ACO1
ACO1
0.200 Biomarker disease RGD Role of iron in the pathogenesis of cysteamine-induced duodenal ulceration in rats. 19342511 2009
Entrez Id: 54742
Gene Symbol: LY6K
LY6K
0.100 GeneticVariation disease GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE Furthermore, the expression of cagA mRNA was confirmed by RT-PCR for the representative strains from both DU and NUD/AV subjects indicating the active cagA promoter regions of these strains. 21195664 2011
Entrez Id: 5340
Gene Symbol: PLG
PLG
0.100 Biomarker disease HPO
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 Biomarker disease BEFREE Our data indicate that H. pylori infection and IL-1RN*2 synergistically determine susceptibility to duodenal ulcer. 15610073 2004
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE Although the cagA gene sequence was completely identical between the gastric corpus and the antrum in all patients, the corpus gastritis was more prominent in patients with gastric cancer than those with duodenal ulcer. 16543737 2006
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation disease BEFREE In addition, the simultaneous carriage of IL-1RN*2, IL-1B-511*C, IL-1B-31*T and IL-1B + 3954*C alleles was a genetic risk factor for DU in patients with H. pylori infection (OR: 3.22; 95%CI = 1.09-9.47). 14632761 2003
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE The CagA protein of Helicobacter pylori is an immunogenic antigen of variable size and unknown function that has been associated with increased virulence as well as two mutually exclusive diseases, duodenal ulcer and gastric carcinoma. 9666002 1998
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation disease BEFREE Logistic regression identified H. pylori infection and NSAIDs use as independent risk factors for peptic ulcer diseases whereas the simultaneous carriage of IL-1B(+3954) allele 2 and IL-1RN allele 2 was associated with reduced risk for duodenal ulcer disease (OR: 0.37, 95% CI = 0.14-0.9). 11531943 2001
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation disease BEFREE Three hundred and ninety-nine patients with gastroduodenal diseases (129 chronic gastritis, 127 duodenal ulcer and 143 non-cardiac gastric cancer) and 264 healthy controls were genotyped for IL-1B-511 and IL-1RN gene polymorphisms by the PCR-RFLP method. 17295877 2007
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 GeneticVariation disease BEFREE However, in 8 (18%) of the cases, more than one subtype was present, and an association between patients with multiple subtypes and disease outcome was observed when compared to patients with isolated subtypes (P = 0.048). cagA was a marker of H. pylori strains for duodenal ulcer disease in our population, and in spite of the differences in the 3' region of the cagA gene, the Japanese methodology was able to detect the cagA status in most cases. 11158115 2001
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 Biomarker disease BEFREE Because gastric cancer and duodenal ulcer are mutually exclusive outcomes of Helicobacter pylori infection, we aimed to investigate possible allelic variant associations of several functional polymorphisms in the IL-1B, IL-1RN, TNFA, and LTA genes in the susceptibility to duodenal ulcer. 16164697 2005
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE CagA gene was positively associated with DU and GU (P<0.01, P<0.02), but not with NUD (P>0.05). 12854168 2003
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 GeneticVariation disease BEFREE Similarly, IL-1RN*2 was not a risk genotype for either gastric cancer or duodenal ulcer. 12788304 2003
Entrez Id: 3557
Gene Symbol: IL1RN
IL1RN
0.100 AlteredExpression disease BEFREE However, increasing age, male sex, and IL1RN*2 were independently associated with duodenal ulcer. 16183821 2005
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE Histology revealed the presence of infection in 68% of cases of mild/chronic nonspecific gastritis with others belonging to the GU sequel. cagA gene carriage was observed in 104 (51%) cases or mostly from DU, GU and GC groups, of which 97 were Western type strains while 3 were East-Asian type strains that are rarely observed in South Asia. vacA allelic variant s1am1 was most commonly observed, followed by s1am2, and s1bm1, with direct correlation in diseased cases (gastritis, GU, DU and GC). 23493000 2013
Entrez Id: 8629
Gene Symbol: JRK
JRK
0.100 GeneticVariation disease GWASDB A genome-wide association study identifies two susceptibility loci for duodenal ulcer in the Japanese population. 22387998 2012
Entrez Id: 6279
Gene Symbol: S100A8
S100A8
0.100 Biomarker disease BEFREE The cagA gene was detected in 100% of 16 Helicobacter pylori isolates from patients with gastric carcinoma versus 78% of 18 isolates from patients with duodenal ulcers (P = 0.344) and only 64% of 22 isolates from patients with gastritis only (P = 0.005) in Brazil. 9774617 1998