Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 5594
Gene Symbol: MAPK1
MAPK1
0.010 Biomarker disease BEFREE SLE T cells and T cells treated with DNA methyltransferase inhibitors and ERK pathway inhibitors overexpress CD70. 15188362 2004
Entrez Id: 2744
Gene Symbol: GLS
GLS
0.010 Biomarker disease BEFREE An optimized IgG antibody capture ELISA (GAC-ELISA) with both WNV and SLEV VLPs was developed to circumvent the frequently observed higher background in the antigen-capture IgG-ELISA (ACG-ELISA). 15472331 2004
Entrez Id: 2048
Gene Symbol: EPHB2
EPHB2
0.010 Biomarker disease BEFREE SLE T cells and T cells treated with DNA methyltransferase inhibitors and ERK pathway inhibitors overexpress CD70. 15188362 2004
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.090 Biomarker disease BEFREE IL10/TNFalpha interaction influences susceptibility to DLE and the appearance of specific autoantibodies in SLE patients, whereas high TNFalpha producer genotypes represent a significant risk factor for SLE. 15800006 2005
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.080 GeneticVariation disease BEFREE The frequency of the interleukin-6 GG and GC genotypes was significantly higher in SLE patients than in controls, and a significantly higher percentage of the G vs C alleles between patients and controls was revealed (odds ratio 2.53, 95% confidence interval 1.37-4.65, chi-squared test 8.16, P < 0.05). 15449022 2005
Entrez Id: 3123
Gene Symbol: HLA-DRB1
HLA-DRB1
0.060 GeneticVariation disease BEFREE Only the frequency of HLA-DRB1*07 allele was higher in SLE patients than controls (odds ratio 2.92, 95% confidence interval 1.16-7.33), but the difference did not reach statistical significance when Bonferroni's adjustment procedure was performed. 15449022 2005
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.050 AlteredExpression disease BEFREE Transcriptional regulation of interleukin 2 in SLE T cells. 15204092 2005
Entrez Id: 919
Gene Symbol: CD247
CD247
0.040 AlteredExpression disease BEFREE We have demonstrated that the expression of TCR zeta chain is significantly decreased in peripheral blood T cells from SLE patients. 15204089 2005
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.040 GeneticVariation disease BEFREE However, an increased frequency ofDD genotype (ACE I/D) was observed in SLE patients with LN who progressed to CRF compared to healthy controls (DD 60%, DI 26.7%, II 13.3% versus 27.7%, 60% and 12.3%, respectively; chi2 = 6.299, P = 0.0429). 15934435 2005
Entrez Id: 355
Gene Symbol: FAS
FAS
0.020 GeneticVariation disease BEFREE Functional promoter haplotypes of the human FAS gene are associated with the phenotype of SLE characterized by thrombocytopenia. 16163374 2005
Entrez Id: 6737
Gene Symbol: TRIM21
TRIM21
0.020 Biomarker disease BEFREE Heritable factors shape natural human IgM reactivity to Ro60/SS-A and may predispose for SLE-associated IgG anti-Ro and anti-La autoantibody production. 16006098 2005
Entrez Id: 6738
Gene Symbol: RO60
RO60
0.010 Biomarker disease BEFREE Heritable factors shape natural human IgM reactivity to Ro60/SS-A and may predispose for SLE-associated IgG anti-Ro and anti-La autoantibody production. 16006098 2005
Entrez Id: 55599
Gene Symbol: RNPC3
RNPC3
0.010 Biomarker disease BEFREE Anti-Sm antibodies are detectable in a percentage of SLE patients comprised between 5 and 30%; they are more prevalent in blacks and because of their high specificity for SLE have been included in the serological criteria for diagnosing the disease.Anti-RNP are detectable in 25-47% of SLE patients; high titers of anti-RNP antibodies are diagnostic of mixed connective tissue disorder (MCTD). 15804705 2005
Entrez Id: 1392
Gene Symbol: CRH
CRH
0.010 Biomarker disease BEFREE However, an increased frequency ofDD genotype (ACE I/D) was observed in SLE patients with LN who progressed to CRF compared to healthy controls (DD 60%, DI 26.7%, II 13.3% versus 27.7%, 60% and 12.3%, respectively; chi2 = 6.299, P = 0.0429). 15934435 2005
Entrez Id: 6402
Gene Symbol: SELL
SELL
0.010 AlteredExpression disease BEFREE No association between E- and L-selectin genes and SLE: soluble L-selectin levels do correlate with genotype and a subset in SLE. 15902275 2005
Entrez Id: 356
Gene Symbol: FASLG
FASLG
0.010 GeneticVariation disease BEFREE The -844C/T polymorphism in the Fas ligand promoter associates with Taiwanese SLE. 15674374 2005
Entrez Id: 10882
Gene Symbol: C1QL1
C1QL1
0.010 Biomarker disease BEFREE However, an increased frequency ofDD genotype (ACE I/D) was observed in SLE patients with LN who progressed to CRF compared to healthy controls (DD 60%, DI 26.7%, II 13.3% versus 27.7%, 60% and 12.3%, respectively; chi2 = 6.299, P = 0.0429). 15934435 2005
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 GeneticVariation disease BEFREE Meta-analysis of TNF-alpha promoter -308 A/G polymorphism and SLE susceptibility. 16418737 2006
Entrez Id: 1636
Gene Symbol: ACE
ACE
0.040 GeneticVariation disease BEFREE No single ACE genotype was consistently associated with subsets of SLE patients. 16830877 2006
Entrez Id: 1493
Gene Symbol: CTLA4
CTLA4
0.030 GeneticVariation disease BEFREE Evidence for unique association signals in SLE at the CD28-CTLA4-ICOS locus in a family-based study. 17000707 2006
Entrez Id: 962
Gene Symbol: CD48
CD48
0.020 GeneticVariation disease BEFREE Results of BLAST search indicated that this sequence shares 93% nucleotide similarity with the sequence of SLEV (strain-MSI.7), confirmed by RT-PCR performed with SLEV specific primers. 16302112 2006
Entrez Id: 940
Gene Symbol: CD28
CD28
0.020 GeneticVariation disease BEFREE Evidence for unique association signals in SLE at the CD28-CTLA4-ICOS locus in a family-based study. 17000707 2006
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.010 GeneticVariation disease BEFREE Evidence for unique association signals in SLE at the CD28-CTLA4-ICOS locus in a family-based study. 17000707 2006
Entrez Id: 3119
Gene Symbol: HLA-DQB1
HLA-DQB1
0.010 GeneticVariation disease BEFREE Associations were strongest in the anti-La positive group (13%) of SLE patients (HLA-DR3, OR = 71 (9 to 539); HLA-DQB1*0201, OR = 35 (5 to 267); TNF2, OR = 10 (2.8 to 36), and LTA2, OR = 4.9 (1.1 to 21)). 16107511 2006
Entrez Id: 3663
Gene Symbol: IRF5
IRF5
0.100 Biomarker disease BEFREE The significantly higher frequency of homozygote individuals for the risk haplotype among Mexican SLE patients could be the result of genetic admixture, and suggests the possibility that IRF5 could be involved in the more active disease and organ involvement known to occur among Mexican SLE patients. 17476532 2007