Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 404663
Gene Symbol: LINC01194
LINC01194
0.010 AlteredExpression disease BEFREE However the low frequency of virus sequences and the absence of TAg protein expression argue against a major role of these viruses in the pathogenesis of human medulloblastomas, meningiomas and ependymomas. 10668898 2000
Entrez Id: 10608
Gene Symbol: MXD4
MXD4
0.010 Biomarker disease BEFREE TCR sequence analysis of the oligodendroglioma showed a JCV rearranged structure not related to a known viral strain, while the astrocytoma and the ependymoma disclosed a JCV Mad-4 strain that is known to induce brain tumors in animals. 10746685 2000
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.090 AlteredExpression disease BEFREE Since in our series just one out of eight anaplastic cases showed negative immunostaining and CDKN2A HD, p16/CDKN2A inactivation may not play an important role in the malignant transformation of ependymomas. 11763427 2001
Entrez Id: 115482713
Gene Symbol: H3P10
H3P10
0.030 Biomarker disease BEFREE Three out of 16 cases were p16 immuno-negative: two corresponded to grade II ependymomas and one to grade III. 11763427 2001
Entrez Id: 4221
Gene Symbol: MEN1
MEN1
0.030 Biomarker disease BEFREE This suggests that loss of wild-type MEN1 may be involved in the malignant progression of a subset of ependymomas. 11275983 2001
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.030 Biomarker disease BEFREE Using FISH, MYCN proto-oncogene DNA amplifications mapped to 2p23-p24 were found in 2 spinal ependymomas of adults. 11303789 2001
Entrez Id: 6750
Gene Symbol: SST
SST
0.020 AlteredExpression disease BEFREE In addition, in 8 cases, protein expression was studied in vitro, using immunohistochemistry, and in vivo, by somatostatin scintigraphy. mRNAs for all 5 subtypes were variably expressed in each ependymoma. 11307146 2001
Entrez Id: 4771
Gene Symbol: NF2
NF2
0.200 GeneticVariation disease BEFREE Analysis of the NF2 gene in oligodendrogliomas and ependymomas. 11996787 2002
Entrez Id: 4771
Gene Symbol: NF2
NF2
0.200 Biomarker disease BEFREE All 5 merlin losses by IHC occurred in spinal ependymomas (P =.047), whereas 5 (71%) DAL-1-negative cases were intracranial (P =.185). 12011257 2002
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.070 Biomarker disease BEFREE This study suggests that ERBB receptor signaling results in aggressive disease behavior in ependymoma by promoting tumor cell proliferation. 12374672 2002
Entrez Id: 4221
Gene Symbol: MEN1
MEN1
0.030 GeneticVariation disease BEFREE The chromosomal instability produced by the telomeric alterations and the mutation in the MEN1 gene could be important events in the tumorigenesis of ependymomas. 12505253 2002
Entrez Id: 7161
Gene Symbol: TP73
TP73
0.030 AlteredExpression disease BEFREE The present results suggest that p73 and p21 overexpression of ependymomas and p21 overexpression of pilocytic astrocytomas are one of the features of these tumors, and that p73 overexpression does not influence the expression manners of either p21 or MDM2 in gliomas. 12241107 2002
Entrez Id: 23136
Gene Symbol: EPB41L3
EPB41L3
0.030 Biomarker disease BEFREE All 5 merlin losses by IHC occurred in spinal ependymomas (P =.047), whereas 5 (71%) DAL-1-negative cases were intracranial (P =.185). 12011257 2002
Entrez Id: 83478
Gene Symbol: ARHGAP24
ARHGAP24
0.020 AlteredExpression disease BEFREE The present results suggest that p73 and p21 overexpression of ependymomas and p21 overexpression of pilocytic astrocytomas are one of the features of these tumors, and that p73 overexpression does not influence the expression manners of either p21 or MDM2 in gliomas. 12241107 2002
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.200 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 1029
Gene Symbol: CDKN2A
CDKN2A
0.090 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 4255
Gene Symbol: MGMT
MGMT
0.040 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 7161
Gene Symbol: TP73
TP73
0.030 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 2056
Gene Symbol: EPO
EPO
0.010 AlteredExpression disease BEFREE We found erythropoietin receptor and erythropoietin expression in common pediatric tumor cells: neuroblastomas, Ewing's sarcoma family of tumors, pediatric brain tumors (medulloblastoma, astrocytoma, and ependymoma), Wilms tumors, rhabdomyosarcomas, and hepatoblastomas (n = 24), and in cell lines derived from some of these tumors (n = 25). 14563949 2003
Entrez Id: 7057
Gene Symbol: THBS1
THBS1
0.010 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 104909134
Gene Symbol: LINC02210-CRHR1
LINC02210-CRHR1
0.010 AlteredExpression disease BEFREE Furthermore, several central and peripheral nervous system tumors express CRF receptors: medulloblastomas, paragangliomas, neuroblastomas, and some meningiomas express CRF(1) receptors, but ependymomas or Ewing sarcomas do not. 12843181 2003
Entrez Id: 6623
Gene Symbol: SNCG
SNCG
0.010 Biomarker disease LHGDN Our study demonstrates immunoreactivity for gamma-synuclein in high-grade glial tumors; immunoreactivity is found in all anaplastic ependymomas but in only 33% of ependymomas and 16% of myxopapillary ependymomas. 12783249 2003
Entrez Id: 7078
Gene Symbol: TIMP3
TIMP3
0.010 GeneticVariation disease BEFREE The frequencies of hypermethylation for the 10 genes were as follows, in oligodendrogliomas and ependymomas, respectively: 80% and 28% for MGMT; 70% and 28% for GSTP1; 66% and 57% for DAPK; 44% and 28% for TP14(ARF); 39% and 0% for THBS1; 24% and 28% for TIMP3; 24% and 14% for TP73; 22% and 0% for TP16(INK4A); 3% and 14% for RB1; and 0% in both neoplasms for TP53. 12850376 2003
Entrez Id: 1394
Gene Symbol: CRHR1
CRHR1
0.010 AlteredExpression disease BEFREE Furthermore, several central and peripheral nervous system tumors express CRF receptors: medulloblastomas, paragangliomas, neuroblastomas, and some meningiomas express CRF(1) receptors, but ependymomas or Ewing sarcomas do not. 12843181 2003
Entrez Id: 2668
Gene Symbol: GDNF
GDNF
0.310 AlteredExpression disease BEFREE We investigated the NGF, BDNF, GDNF and NGF receptors (TrkA and p75) expression in the tumour tissues, cerebrospinal fluid (CSF) and plasma of ten children affected by low-grade astrocytomas and ependymomas. 15138791 2004