Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 80146
Gene Symbol: UXS1
UXS1
0.010 Biomarker disease BEFREE PEI staining was studied by electron and reflection contrast microscopy in human growth plates, osteochondromas and five different proteoglycan-deficient zebrafish mutants displaying one of the following skeletal phenotypes: dackel (dak/ext2), lacking heparan sulphate and identified as a model for human multiple osteochondromas; hi307 (β3gat3), deficient for most glycosaminoglycans; pinscher (pic/slc35b2), presenting with defective sulphation of glycosaminoglycans; hi954 (uxs1), lacking most glycosaminoglycans; and knypek (kny/gpc4), missing the protein core of the glypican-4 proteoglycan. 21506131 2011
Entrez Id: 7227
Gene Symbol: TRPS1
TRPS1
0.020 Biomarker disease BEFREE It combines the clinical features of TRPS I and multiple cartilaginous exostoses (EXT). 7711731 1995
Entrez Id: 7227
Gene Symbol: TRPS1
TRPS1
0.020 GeneticVariation disease BEFREE The tricho-rhino-phalangeal syndrome type II (TRPS II, or Langer-Giedion syndrome) is an example of contiguous gene syndromes, as it comprises the clinical features of two autosomal dominant diseases, TRPS I and a form of multiple cartilaginous exostoses caused by mutations in the EXT1 gene. 10647898 1999
Entrez Id: 6934
Gene Symbol: TCF7L2
TCF7L2
0.010 GeneticVariation disease BEFREE Thus we investigated if the key T allele of single nucleotide polymorphism (SNP) rs7903146 within the TCF7L2 locus, which is strongly over-represented among T2D cases, was also associated with HME. 25498973 2015
Entrez Id: 6783
Gene Symbol: SULT1E1
SULT1E1
0.010 Biomarker disease BEFREE EST database analysis has demonstrated additional gene family members, EXT-like genes (EXTL1, EXTL2, and EXTL3), not associated with a HME locus. 10878610 2000
Entrez Id: 6779
Gene Symbol: STATH
STATH
0.010 GeneticVariation disease BEFREE A model of heterogeneity with linkage of the disease gene to the STR markers in 70% of the families (with a 95% confidence interval of 26%-96%) produced a maximum LOD score of 8.11, with the most likely position of EXT between D8S85 and D8S199. 8317501 1993
Entrez Id: 347734
Gene Symbol: SLC35B2
SLC35B2
0.010 Biomarker disease BEFREE PEI staining was studied by electron and reflection contrast microscopy in human growth plates, osteochondromas and five different proteoglycan-deficient zebrafish mutants displaying one of the following skeletal phenotypes: dackel (dak/ext2), lacking heparan sulphate and identified as a model for human multiple osteochondromas; hi307 (β3gat3), deficient for most glycosaminoglycans; pinscher (pic/slc35b2), presenting with defective sulphation of glycosaminoglycans; hi954 (uxs1), lacking most glycosaminoglycans; and knypek (kny/gpc4), missing the protein core of the glypican-4 proteoglycan. 21506131 2011
Entrez Id: 169026
Gene Symbol: SLC30A8
SLC30A8
0.010 AlteredExpression disease BEFREE Recently, several groups have carried out whole-genome association studies in European and European-origin populations and found novel type 2 diabetes-susceptibility genes, fat mass and obesity associated (FTO), solute carrier family 30 (zinc transporter), member 8 (SLC30A8), haematopoietically expressed homeobox (HHEX), exostoses (multiple) 2 (EXT2), CDK5 regulatory subunit associated protein 1-like 1 (CDKAL1), cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) (CDKN2B) and insulin-like growth factor 2 mRNA binding protein 2 (IGF2BP2), which had not been in the list of functional candidates. 17928989 2007
Entrez Id: 6473
Gene Symbol: SHOX
SHOX
0.100 Biomarker disease HPO
Entrez Id: 2810
Gene Symbol: SFN
SFN
0.010 GeneticVariation disease BEFREE Results obtained showed that one of the two HME samples that underwent DNA sequencing analysis (HME-1) had a novel mutation for an early stop codon, which led to an aberrant protein, migrating at a lower molecular weight position. 18452536 2008
Entrez Id: 6383
Gene Symbol: SDC2
SDC2
0.020 GeneticVariation disease BEFREE Hereditary multiple exostoses (HME), an autosomal skeletal disorder characterized by cartilage-capped excrescences, has been ascribed to mutations in EXT 1 and EXT 2, two tumor suppressor-related genes encoding glycosyltransferases involved in the heparan sulfate proteoglycan (HSPG) biosynthesis. 10934647 2000
Entrez Id: 6383
Gene Symbol: SDC2
SDC2
0.020 Biomarker disease BEFREE HSPG-deficient zebrafish uncovers dental aspect of multiple osteochondromas. 22253766 2012
Entrez Id: 401474
Gene Symbol: SAMD12
SAMD12
0.010 GeneticVariation disease BEFREE RNA-Seq detects a SAMD12-EXT1 fusion transcript and leads to the discovery of an EXT1 deletion in a child with multiple osteochondromas. 30632316 2019
Entrez Id: 5781
Gene Symbol: PTPN11
PTPN11
0.300 Biomarker disease CTD_human Loss-of-function mutations in PTPN11 cause metachondromatosis, but not Ollier disease or Maffucci syndrome. 21533187 2011
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.010 Biomarker disease BEFREE Systematic interactome mapping of acute lymphoblastic leukemia cancer gene products reveals EXT-1 tumor suppressor as a Notch1 and FBWX7 common interactor. 27229929 2016
Entrez Id: 4488
Gene Symbol: MSX2
MSX2
0.010 Biomarker disease BEFREE The combination of multiple exostoses (EXT) and enlarged parietal foramina (foramina parietalia permagna, FPP) represent the main features of the proximal 11p deletion syndrome (P11pDS), a contiguous gene syndrome (MIM 601224) caused by an interstitial deletion on the short arm of chromosome 11. 14872200 2004
Entrez Id: 4321
Gene Symbol: MMP12
MMP12
0.020 Biomarker disease BEFREE Multiple osteochondromas (MO; also referred to as hereditary multiple exostoses [HME] in the literature) is an autosomal dominant disorder characterized by benign, cartilage-capped bone tumors that grow from the metaphyses of long bones. 18976157 2008
Entrez Id: 4321
Gene Symbol: MMP12
MMP12
0.020 GeneticVariation disease BEFREE We report a mouse model of multiple osteochondromas (MO), an autosomal dominant disease in humans, also known as multiple hereditary exostoses (MHE or HME) and characterized by the formation of cartilage-capped osseous growths projecting from the metaphyses of endochondral bones. 20080592 2010
Entrez Id: 1326
Gene Symbol: MAP3K8
MAP3K8
0.010 Biomarker disease BEFREE EST database analysis has demonstrated additional gene family members, EXT-like genes (EXTL1, EXTL2, and EXTL3), not associated with a HME locus. 10878610 2000
Entrez Id: 23592
Gene Symbol: LEMD3
LEMD3
0.010 GeneticVariation disease BEFREE Here we describe a familial case of osteopoikilosis in which a novel heterozygous LEMD3 mutation coincides with a novel mutation in EXT1, a gene involved in aetiology of multiple exostosis syndrome. 20618940 2010
Entrez Id: 3949
Gene Symbol: LDLR
LDLR
0.010 GeneticVariation disease BEFREE To further evaluate the relevance of LDL-receptor (LDLr) pathway and heparan sulfate proteoglycans (HSPGs) in TG homeostasis, we analyzed fasting and postprandial TG levels in mice bearing combined heterozygous mutations in both Exostosin (Ext) 1 and Ldlr, in subjects with hereditary multiple exostosis (HME) due to a heterozygous loss-of-function mutation in EXT1 or EXT2 (N = 13), and in patients with heterozygous mutations in LDLR [familial hypercholesterolemia (FH)] and SNPs in major HSPG-related genes (n = 22). 25568062 2015
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.020 GeneticVariation disease BEFREE Hereditary multiple exostoses (HME), an autosomal skeletal disorder characterized by cartilage-capped excrescences, has been ascribed to mutations in EXT 1 and EXT 2, two tumor suppressor-related genes encoding glycosyltransferases involved in the heparan sulfate proteoglycan (HSPG) biosynthesis. 10934647 2000
Entrez Id: 3339
Gene Symbol: HSPG2
HSPG2
0.020 Biomarker disease BEFREE HSPG-deficient zebrafish uncovers dental aspect of multiple osteochondromas. 22253766 2012
Entrez Id: 10855
Gene Symbol: HPSE
HPSE
0.030 Biomarker disease BEFREE This, in turn, is determined by the combinatorial action of enzymes for biosynthesis and modification of HS such as exostosis (EXTs), sulfotransferases (NDSTs), and heparanase 1 (HPSE1). 31611818 2019
Entrez Id: 10855
Gene Symbol: HPSE
HPSE
0.030 Biomarker disease BEFREE These properties may allow heparanase to play a role in exostosis genesis and pathogenesis, thus making it a conceivable therapeutic target in hereditary multiple exostoses. 25863260 2015