Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 641638
Gene Symbol: SNHG6
SNHG6
0.010 Biomarker group BEFREE Our study reveals that SNHG6 may contribute to VSD formation via negative regulation of miR-101 and activation of Wnt/β-catenin pathway. 30782246 2019
Entrez Id: 406966
Gene Symbol: MIR191
MIR191
0.010 Biomarker group BEFREE In addition, we identified 8 microRNAs that have the potential to be biomarkers for the detection of VSD including: miR-191, miR-548F1, miR-148A, miR-423, miR-92B, miR-611, miR-2110, and miR-548H4. 30897084 2019
Entrez Id: 100500900
Gene Symbol: MIR3691
MIR3691
0.010 Biomarker group BEFREE The rs6563G > A genetic variation appears to be associated with congenital VSD through gene regulatory effects of miR-3691-3p on the NOTCH1 gene. 30629480 2019
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.010 AlteredExpression group BEFREE Our study reveals that SNHG6 may contribute to VSD formation via negative regulation of miR-101 and activation of Wnt/β-catenin pathway. 30782246 2019
Entrez Id: 23001
Gene Symbol: WDFY3
WDFY3
0.010 Biomarker group BEFREE Wdfy3-deficient mice displayed various congenital heart defects including membranous ventricular septal defect (VSD), aortic overriding (AO), double outlet right ventricle (DORV), thinning of ventricular wall, ventricular dilation, and disorganized ventricular trabeculation at E14.5. 30428088 2019
Entrez Id: 4548
Gene Symbol: MTR
MTR
0.010 GeneticVariation group BEFREE We investigated whether a polymorphism (A2756G) of the methionine synthase and 2 polymorphisms (A66G and C524T) of the MTRR gene are associated with VSDs. 29293099 2019
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.010 GeneticVariation group BEFREE We report here our findings on the relationship between VSD and microRNA (miRNA)-3691-3p target sequence single-nucleotide polymorphisms (SNPs) in the 3' untranslated region of the NOTCH1 gene. 30629480 2019
Entrez Id: 55384
Gene Symbol: MEG3
MEG3
0.010 Biomarker group BEFREE In conclusion, UA and SM are essential VSD-associated metabolic biomarkers and MEG3/miR-7-5p/EGFR axis is critical to the regulation of autophagy in cardiomyocytes. 31559872 2019
Entrez Id: 4607
Gene Symbol: MYBPC3
MYBPC3
0.010 GeneticVariation group BEFREE By applying our approach to a VSD trio, we fish out an unreported gene-CD80, a combination of two genes-MYBPC3 and TRDN and a lncRNA-NONHSAT096266.2, which are highly likely to be VSD-related. 31440271 2019
Entrez Id: 5076
Gene Symbol: PAX2
PAX2
0.010 Biomarker group BEFREE We firstly reported skeletal deformity (fourth metatarsal microsomia), ovarian teratoma, and congenital ventricular septal defect as new phenotypes of PAX2-related disorder which enlarged the phenotypic spectrum. 31060108 2019
Entrez Id: 1360
Gene Symbol: CPB1
CPB1
0.010 AlteredExpression group BEFREE Although transthoracic device closure of VSD seems to be less traumatic and involves a quicker recovery, it also induces a systemic inflammatory response as measured by WBC count and PCT, CRP and IL-6 levels, and the altered trends in inflammatory markers were similar to those of conventional surgery under CPB. 30961628 2019
Entrez Id: 7114
Gene Symbol: TMSB4X
TMSB4X
0.010 Biomarker group BEFREE ALDOB and Tβ4 might be potential biomarkers applied for identifying VSD in the further works. 31070245 2019
Entrez Id: 941
Gene Symbol: CD80
CD80
0.010 GeneticVariation group BEFREE By applying our approach to a VSD trio, we fish out an unreported gene-CD80, a combination of two genes-MYBPC3 and TRDN and a lncRNA-NONHSAT096266.2, which are highly likely to be VSD-related. 31440271 2019
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.010 AlteredExpression group BEFREE Although transthoracic device closure of VSD seems to be less traumatic and involves a quicker recovery, it also induces a systemic inflammatory response as measured by WBC count and PCT, CRP and IL-6 levels, and the altered trends in inflammatory markers were similar to those of conventional surgery under CPB. 30961628 2019
Entrez Id: 51592
Gene Symbol: TRIM33
TRIM33
0.010 GeneticVariation group BEFREE While mesoderm-specific Trim33 mutants did not display noticeable phenotypes, epiblast-specific Trim33 mutant embryos developed ventricular septal defects, showed sparse trabeculation and abnormally thin compact myocardium, and died as a result of cardiac failure during late gestation. 30940539 2019
Entrez Id: 10345
Gene Symbol: TRDN
TRDN
0.010 Biomarker group BEFREE By applying our approach to a VSD trio, we fish out an unreported gene-CD80, a combination of two genes-MYBPC3 and TRDN and a lncRNA-NONHSAT096266.2, which are highly likely to be VSD-related. 31440271 2019
Entrez Id: 1956
Gene Symbol: EGFR
EGFR
0.010 Biomarker group BEFREE In conclusion, UA and SM are essential VSD-associated metabolic biomarkers and MEG3/miR-7-5p/EGFR axis is critical to the regulation of autophagy in cardiomyocytes. 31559872 2019
Entrez Id: 5579
Gene Symbol: PRKCB
PRKCB
0.010 AlteredExpression group BEFREE These effects could also be exerted via the upregulation of eight specific target genes, the subsequent over-activation of the PKC and PI3 K-Akt pathways, and the eventual abnormal cardiac development and VSD. 28822034 2018
Entrez Id: 113457
Gene Symbol: TUBA3D
TUBA3D
0.010 Biomarker group BEFREE Genomic analysis revealed important chr13 genes such as FOXO1, Col4A1, HMGBB1, FLT1, EFNB2, EDNRB, GAS6, TNFSF1, STARD13, TRPC4, TUBA3C, and TUBA3D, and their regulatory partners on other chromosomes associated with cardiovascular disorders, atrial and ventricular septal defects. 30423812 2018
Entrez Id: 100302160
Gene Symbol: MIR1233-1
MIR1233-1
0.010 PosttranslationalModification group BEFREE There were no data on epigenomic association of CHD in Africa, however, other studies have shown an altered expression of miR-421 and miR-1233-3p to be associated with TOF and hypermethylation of CpG islands in the promoter of SCO2 gene also been associated with TOF and VSD in children with non-syndromic CHD. 29762087 2018
Entrez Id: 112476
Gene Symbol: PRRT2
PRRT2
0.010 AlteredExpression group BEFREE These effects could also be exerted via the upregulation of eight specific target genes, the subsequent over-activation of the PKC and PI3 K-Akt pathways, and the eventual abnormal cardiac development and VSD. 28822034 2018
Entrez Id: 9997
Gene Symbol: SCO2
SCO2
0.010 GeneticVariation group BEFREE There were no data on epigenomic association of CHD in Africa, however, other studies have shown an altered expression of miR-421 and miR-1233-3p to be associated with TOF and hypermethylation of CpG islands in the promoter of SCO2 gene also been associated with TOF and VSD in children with non-syndromic CHD. 29762087 2018
Entrez Id: 156
Gene Symbol: GRK2
GRK2
0.010 Biomarker group BEFREE GRK2/5/6 triple null mice at E14.5 exhibited left and right heart blood intermixing through single atrioventricular valves or large membranous ventricular septal defects. 29969579 2018
Entrez Id: 5578
Gene Symbol: PRKCA
PRKCA
0.010 AlteredExpression group BEFREE These effects could also be exerted via the upregulation of eight specific target genes, the subsequent over-activation of the PKC and PI3 K-Akt pathways, and the eventual abnormal cardiac development and VSD. 28822034 2018
Entrez Id: 4208
Gene Symbol: MEF2C
MEF2C
0.010 GeneticVariation group BEFREE As a result, a novel heterozygous MEF2C mutation, p.R15C, was detected in an index patient with congenital double outlet right ventricle (DORV) as well as ventricular septal defect. 29468350 2018