Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 GeneticVariation disease BEFREE Genome wide sequencing studies have dissected the repertoire of the genetic alterations driving AITL uncovering a highly recurrent Gly17Val somatic mutation in the small GTPase RHOA and major role for mutations in epigenetic regulators, such as TET2, DNMT3A and IDH2, and signaling factors (e.g., FYN and CD28). 27177312 2016
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 GeneticVariation disease BEFREE Moreover, half of the patients carried virtually mutually exclusive mutations in other TCR-related genes, most frequently in PLCG1 (14.1%), CD28 (9.4%, exclusively in AITL), PI3K elements (7%), CTNNB1 (6%), and GTF2I (6%). 27369867 2016
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 Biomarker disease BEFREE Somatic driver mutations have been found in TET2, IDH2, DNMT3A, RHOA, FYN, PLCG1, and CD28, whereas germline susceptibility to AITL has to our knowledge not been studied. 30097855 2019
Entrez Id: 968
Gene Symbol: CD68
CD68
0.010 Biomarker disease BEFREE We also analyzed the infiltration of CD68- and CD163-positive macrophages in tumor tissue of AITL. 29100307 2017
Entrez Id: 80790
Gene Symbol: CMIP
CMIP
0.010 AlteredExpression disease BEFREE In a previous study, c‑Maf was discovered as an oncogene transduced in the avian AS42 retrovirus, and was found to be overexpressed in multiple myeloma and angioimmunoblastic T‑cell lymphoma. c‑Maf inducing protein (CMIP) is involved in the c‑Maf signaling pathway, which was reported to serve an important role in human minimal change nephrotic syndrome and in human reading and language related behavior. 28944848 2017
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.020 Biomarker disease BEFREE AITL cases were more likely than PTCL-TFH cases to contain expanded CD21-positive follicular dendritic cell meshworks, clear cell cytology and polymorphous inflammatory background; however, there was a significant (P<0.005) Kruskal-Wallis trend in all morphologic variables between the 3 groups suggesting a continuum from PTCL-NOS to PTCL-TFH to AITL. 31283630 2019
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.020 GeneticVariation disease BEFREE Among these, CCR4 expression and the CD21(+) network in RHOA-mutated AITL cases were more extensive than in the RHOA mutation-negative AITL cases (P<0.05). 27158755 2016
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.020 AlteredExpression disease BEFREE The serum level of CRP may be applied as an independent prognostic factor for AITL. 28953629 2017
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.020 Biomarker disease BEFREE Serum levels of SAA and CRP (C-reactive protein) were positively correlated in patients with CHB (<i>P</i> < 0.001), pyogenic liver abscess (<i>P</i> = 0.045), and active AILD (<i>P</i> = 0.02). 31798280 2019
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.010 GeneticVariation disease BEFREE Moreover, half of the patients carried virtually mutually exclusive mutations in other TCR-related genes, most frequently in PLCG1 (14.1%), CD28 (9.4%, exclusively in AITL), PI3K elements (7%), CTNNB1 (6%), and GTF2I (6%). 27369867 2016
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE Recently, genome-wide approaches have suggested follicular CD4 T-helper cells (T(H)F) as additional CXCL13 producers in the germinal centre and the neoplastic counterpart of T(H)F (CD4+ tumour T-cells in angioimmunoblastic T-cell lymphoma) retains the capability of producing this chemokine. 18792075 2008
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE Our study assesses the utility of an immunohistochemical panel of 5 TFH markers (CD10, BCL6, PD-1, CXCL13, and ICOS) for identification of TFH phenotype in angioimmunoblastic T-cell lymphoma (AITL) and PTCL not otherwise specified (NOS). 31283630 2019
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE CXCL13 was a relatively sensitive marker in AITL, expressed in 84% of tested cases; however, only 3% of PTCL-NOS cases were tested. 28209473 2017
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 Biomarker disease BEFREE Angioimmunoblastic T-cell lymphoma (AITL) comprises CD4+ CXCL13+ neoplastic cells displaying overlapping immunophenotypical and molecular features with normal follicular helper T cells. 19074096 2008
Entrez Id: 3576
Gene Symbol: CXCL8
CXCL8
0.010 Biomarker disease BEFREE Immunological biomarker analysis showed elevated levels of inflammatory cytokines (IL-1β, IFN-γ, TNF-α, IL-8) and immunoglobulin A in the saliva of patients with AILD. 29969462 2018
Entrez Id: 2833
Gene Symbol: CXCR3
CXCR3
0.010 Biomarker disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 643
Gene Symbol: CXCR5
CXCR5
0.010 AlteredExpression disease BEFREE We further hypothesized that the AITL clone itself could be responsible for the preferential accumulation of MCs at sites of infiltration through the synthesis of CXCL-13 and its interaction with the CXCR3 and CXCR5 receptors expressed on MCs. 20595635 2010
Entrez Id: 114757
Gene Symbol: CYGB
CYGB
0.010 AlteredExpression disease BEFREE We also suggest inferior survival in AITL with the combined expression of SIRT1 and clinical characteristics of high IPI scores, high clinical stage, increased serum LDH, decreased HGB and increased γ-Globulin. 27124741 2016
Entrez Id: 1737
Gene Symbol: DLAT
DLAT
0.010 Biomarker disease BEFREE Autoimmune liver disease (AILD) encompasses 3 main distinct clinical diseases: autoimmune hepatitis, primary biliary cholangitis (formally known as cirrhosis, PBC) and primary sclerosing cholangitis (PSC). 27170385 2017
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 Biomarker disease BEFREE Although frequent mutations in TET2, IDH2 and DNMT3A, which are common to various hematologic malignancies, have been identified in AITL, the molecular pathogenesis specific to this lymphoma subtype is unknown. 24413737 2014
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 GeneticVariation disease BEFREE Genome wide sequencing studies have dissected the repertoire of the genetic alterations driving AITL uncovering a highly recurrent Gly17Val somatic mutation in the small GTPase RHOA and major role for mutations in epigenetic regulators, such as TET2, DNMT3A and IDH2, and signaling factors (e.g., FYN and CD28). 27177312 2016
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 Biomarker disease CTD_human Somatic RHOA mutation in angioimmunoblastic T cell lymphoma. 24413737 2014
Entrez Id: 1788
Gene Symbol: DNMT3A
DNMT3A
0.390 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018