Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 4842
Gene Symbol: NOS1
NOS1
0.100 GeneticVariation disease BEFREE The RHOA G17V mutation was found in 15 (75%) of 20 AITL and two (22%) of nine PTCL, NOS. 31394087 2019
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE Recently, a novel recurring somatic mutation in RHOA, encoding p.Gly17Val, was discovered in nearly 70% of AITLs and in a smaller proportion of peripheral T-cell lymphomas, not otherwise specified (PTCL-NOS). 26574844 2016
Entrez Id: 4843
Gene Symbol: NOS2
NOS2
0.100 GeneticVariation disease BEFREE These analyses identified highly recurrent epigenetic factor mutations in TET2, DNMT3A and IDH2 as well as a new highly prevalent RHOA mutation encoding a p.Gly17Val alteration present in 22 of 35 (67%) angioimmunoblastic T cell lymphoma (AITL) samples and in 8 of 44 (18%) PTCL, not otherwise specified (PTCL-NOS) samples. 24413734 2014
Entrez Id: 238
Gene Symbol: ALK
ALK
0.060 GeneticVariation disease BEFREE For example, genetic alterations have been discovered, including signal transducer and activator of transcription (STAT)3 and STAT5b mutations in several PTCLs, disease-specific ras homolog family member A (RHOA) mutations in angioimmunoblastic T cell lymphoma (AITL), and recurrent translocations at the dual specificity phosphatase 22 (DUSP22) locus in anaplastic lymphoma receptor tyrosine kinase (ALK)-negative anaplastic large cell lymphomas (ALCLs). 26431836 2015
Entrez Id: 10563
Gene Symbol: CXCL13
CXCL13
0.060 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.050 GeneticVariation disease BEFREE This is the second common genetic lesion identified in AITL after TET2 and extends the number of neoplastic diseases where IDH1 and IDH2 mutations may play a role. 22215888 2012
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.050 GeneticVariation disease BEFREE While our case suggests that circulating D-2HG is not a reliable marker of IDH mutation in AITL, more cases need to be studied to arrive at a definite conclusion. 26617922 2015
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 GeneticVariation disease BEFREE Genome wide sequencing studies have dissected the repertoire of the genetic alterations driving AITL uncovering a highly recurrent Gly17Val somatic mutation in the small GTPase RHOA and major role for mutations in epigenetic regulators, such as TET2, DNMT3A and IDH2, and signaling factors (e.g., FYN and CD28). 27177312 2016
Entrez Id: 940
Gene Symbol: CD28
CD28
0.030 GeneticVariation disease BEFREE Moreover, half of the patients carried virtually mutually exclusive mutations in other TCR-related genes, most frequently in PLCG1 (14.1%), CD28 (9.4%, exclusively in AITL), PI3K elements (7%), CTNNB1 (6%), and GTF2I (6%). 27369867 2016
Entrez Id: 3492
Gene Symbol: IGH
IGH
0.030 GeneticVariation disease BEFREE However, in angioimmunoblastic lymphadenopathy (AILD), first described as a nonneoplastic proliferation associated with immunodeficiency, the heterogeneity of TCR and IgH gene rearrangements suggest that some cases may harbor multiple lymphoid clones. 10666395 2000
Entrez Id: 29851
Gene Symbol: ICOS
ICOS
0.030 GeneticVariation disease BEFREE We studied a series of 98 n-PTCL samples (comprising 57 AITL and 41 PTCL-NOS) with five T<sub>FH</sub> antibodies (CD10, BCL-6, PD-1, CXCL13, ICOS), looked for mutations in five of the genes most frequently mutated in AITL (<i>TET2</i>, <i>DNMT3A, IDH2, RHOA</i> and <i>PLCG1</i>) using the Next-Generation-Sequencing Ion Torrent platform, and measured the correlations of these characteristics with morphology and clinical features. 29662631 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.020 GeneticVariation disease BEFREE A p53 gene mutation was only found in 1 case (1/8 cases) of angioimmunoblastic lymphoma, which showed cytologic tumor progression. 11230707 2001
Entrez Id: 5335
Gene Symbol: PLCG1
PLCG1
0.020 GeneticVariation disease BEFREE Moreover, half of the patients carried virtually mutually exclusive mutations in other TCR-related genes, most frequently in PLCG1 (14.1%), CD28 (9.4%, exclusively in AITL), PI3K elements (7%), CTNNB1 (6%), and GTF2I (6%). 27369867 2016
Entrez Id: 3702
Gene Symbol: ITK
ITK
0.020 GeneticVariation disease BEFREE Around one fifth of PTCL-F exhibits t(5;9)(q33;q22)/ITK-SYK chromosomal translocation, which is essentially absent in AITL. 25337257 2014
Entrez Id: 6850
Gene Symbol: SYK
SYK
0.020 GeneticVariation disease BEFREE Around one fifth of PTCL-F exhibits t(5;9)(q33;q22)/ITK-SYK chromosomal translocation, which is essentially absent in AITL. 25337257 2014
Entrez Id: 1380
Gene Symbol: CR2
CR2
0.020 GeneticVariation disease BEFREE Among these, CCR4 expression and the CD21(+) network in RHOA-mutated AITL cases were more extensive than in the RHOA mutation-negative AITL cases (P<0.05). 27158755 2016
Entrez Id: 5156
Gene Symbol: PDGFRA
PDGFRA
0.020 GeneticVariation disease BEFREE We present a rare case of angioimmunoblastic T-cell lymphoma (AITL) and HES with the FIP1L1/PDGFRA gene rearrangement. 28885361 2017
Entrez Id: 2091
Gene Symbol: FBL
FBL
0.020 GeneticVariation disease BEFREE MRI-derived measures of liver and spleen stiffness as well as laboratory-based APRI and FIB-4 scores are highly associated with imaging findings of portal hypertension in children and young adults with AILD and thus might be useful for predicting portal hypertension impending onset and directing personalized patient management. 30607435 2019
Entrez Id: 2969
Gene Symbol: GTF2I
GTF2I
0.010 GeneticVariation disease BEFREE Moreover, half of the patients carried virtually mutually exclusive mutations in other TCR-related genes, most frequently in PLCG1 (14.1%), CD28 (9.4%, exclusively in AITL), PI3K elements (7%), CTNNB1 (6%), and GTF2I (6%). 27369867 2016
Entrez Id: 81608
Gene Symbol: FIP1L1
FIP1L1
0.010 GeneticVariation disease BEFREE We present a rare case of angioimmunoblastic T-cell lymphoma (AITL) and HES with the FIP1L1/PDGFRA gene rearrangement. 28885361 2017
Entrez Id: 7409
Gene Symbol: VAV1
VAV1
0.010 GeneticVariation disease BEFREE Our findings indicate that the G17V RHOA-VAV1 axis may provide a new therapeutic target in AITL. 28832024 2018
Entrez Id: 673
Gene Symbol: BRAF
BRAF
0.010 GeneticVariation disease BEFREE We report the first case of BRAF V600E-positive indeterminate cell tumor in association with angioimmunoblastic T-cell lymphoma. 25787243 2015
Entrez Id: 2534
Gene Symbol: FYN
FYN
0.010 GeneticVariation disease BEFREE Genome wide sequencing studies have dissected the repertoire of the genetic alterations driving AITL uncovering a highly recurrent Gly17Val somatic mutation in the small GTPase RHOA and major role for mutations in epigenetic regulators, such as TET2, DNMT3A and IDH2, and signaling factors (e.g., FYN and CD28). 27177312 2016
Entrez Id: 445347
Gene Symbol: TARP
TARP
0.010 GeneticVariation disease BEFREE TCR beta (TCRB) and TCR gamma (TCRG) gene rearrangements were analysed from 17 WHO-defined cases of AILT by PCR for the presence of TCR clonality. 18952689 2009
Entrez Id: 6427
Gene Symbol: SRSF2
SRSF2
0.010 GeneticVariation disease BEFREE The frequencies of TET2/DNMT3A and SRSF2 variants could support the hypothesis that TET2/DNMT3A mutations occurred in an early progenitor cell, which later progressed to both the AITL and CMML clones. 27353473 2017