Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 3586
Gene Symbol: IL10
IL10
0.700 Biomarker group MGD
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.600 Biomarker group MGD
Entrez Id: 6774
Gene Symbol: STAT3
STAT3
0.400 Biomarker group MGD
Entrez Id: 3569
Gene Symbol: IL6
IL6
0.400 Biomarker group CTD_human
Entrez Id: 3559
Gene Symbol: IL2RA
IL2RA
0.350 Biomarker group MGD
Entrez Id: 3558
Gene Symbol: IL2
IL2
0.300 Biomarker group MGD
Entrez Id: 7494
Gene Symbol: XBP1
XBP1
0.270 Biomarker group MGD
Entrez Id: 4583
Gene Symbol: MUC2
MUC2
0.260 Biomarker group MGD
Entrez Id: 864
Gene Symbol: RUNX3
RUNX3
0.230 Biomarker group MGD
Entrez Id: 959
Gene Symbol: CD40LG
CD40LG
0.220 Biomarker group MGD
Entrez Id: 4783
Gene Symbol: NFIL3
NFIL3
0.210 Biomarker group MGD
Entrez Id: 2201
Gene Symbol: FBN2
FBN2
0.010 Biomarker group BEFREE <b>Abbreviations</b> PSC: Primary sclerosing cholangitis; IBD: inflammatory bowel disease; CCA: cholangiocarcinoma; SAP: serum alkaline phosphatase; ULN: upper limit of normal; UDCA: ursodeoxycholic acid; CRP: c-reactive protein; AST: aspartate aminotransferase; ALT: alanine aminotransferase; INR: international normalized ratio; FIS: fatigue impact scale; AE: adverse events; PREsTo: PSC risk estimate tool; IQR: interquartile range; ELF: enhanced liver fibrosis. 31131678 2019
Entrez Id: 55054
Gene Symbol: ATG16L1
ATG16L1
0.500 Biomarker group BEFREE <b>Abbreviations:</b> ATG16L1: autophagy-related 16-like 1 (S. cerevisiae); DAMP: damage-associated molecular pattern; HBSS: Hanks balanced salt solution; HMGB1: high mobility group box 1; IBD: inflammatory bowel disease; IL1B/Il-1β: interleukin 1 beta; IL10: interleukin 10; IL17/IL-17: interleukin 17; MEFs: mouse embryonic fibroblasts; STAT3: signal transducer and activator of transcription 3; TLR: toll-like receptor; TNF/TNF-α: tumor necrosis factor. 30894054 2019
Entrez Id: 3146
Gene Symbol: HMGB1
HMGB1
0.100 Biomarker group BEFREE <b>Abbreviations:</b> ATG16L1: autophagy-related 16-like 1 (S. cerevisiae); DAMP: damage-associated molecular pattern; HBSS: Hanks balanced salt solution; HMGB1: high mobility group box 1; IBD: inflammatory bowel disease; IL1B/Il-1β: interleukin 1 beta; IL10: interleukin 10; IL17/IL-17: interleukin 17; MEFs: mouse embryonic fibroblasts; STAT3: signal transducer and activator of transcription 3; TLR: toll-like receptor; TNF/TNF-α: tumor necrosis factor. 30894054 2019
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 Biomarker group BEFREE <b>Abbreviations:</b> ATG16L1: autophagy-related 16-like 1 (S. cerevisiae); DAMP: damage-associated molecular pattern; HBSS: Hanks balanced salt solution; HMGB1: high mobility group box 1; IBD: inflammatory bowel disease; IL1B/Il-1β: interleukin 1 beta; IL10: interleukin 10; IL17/IL-17: interleukin 17; MEFs: mouse embryonic fibroblasts; STAT3: signal transducer and activator of transcription 3; TLR: toll-like receptor; TNF/TNF-α: tumor necrosis factor. 30894054 2019
Entrez Id: 2597
Gene Symbol: GAPDH
GAPDH
0.020 Biomarker group BEFREE <b>Abbreviations:</b> DMEM, Dulbecco's Modified Eagle's Medium; GAPDH, glyceraldehyde-3-phosphate dehydrogenase; IBD, inflammatory bowel disease; IL, interleukin; ITS, insulin, transferrin, selenium; TBS, Tris buffered saline; TNF, tumor necrosis factor. 30917710 2019
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.100 Biomarker group BEFREE <b>Background and aims:</b> A multicentre, retrospective, non-interventional, patient chart review study was conducted to investigate deep (DR) and histological remission rates during maintenance therapy with biological agents in inflammatory bowel disease (IBD).<b>Methods:</b> We reviewed clinical, endoscopic, and histological findings, and laboratory markers such as C-reactive protein (CRP) and faecal calprotectin (FC) on average of nine years after the initiation of anti-TNF-therapy. 31841064 2020
Entrez Id: 3596
Gene Symbol: IL13
IL13
0.080 AlteredExpression group BEFREE <b>Background:</b> Mucosal IL-13 Receptor alpha 2 (<i>IL13RA2</i>) mRNA expression is one of the best predictive markers for primary non-responsiveness to infliximab therapy in patients with inflammatory bowel disease (IBD). 30619339 2018
Entrez Id: 6356
Gene Symbol: CCL11
CCL11
0.040 AlteredExpression group BEFREE <b>Conclusion:</b> The combination of SAA, IL-6, IL-8, and Eotaxin-1 reliably predicts endoscopic disease activity in IBD and might be valuable for monitoring disease activity and management of the disease. 31772929 2019
Entrez Id: 3598
Gene Symbol: IL13RA2
IL13RA2
0.020 Biomarker group BEFREE <b>Conclusions:</b> The data suggest that IL-13Rα2 on epithelial cells contributes to IBD pathology by negatively influencing goblet cell recovery, goblet cell function and epithelial restoration after injury. 30619339 2018
Entrez Id: 23528
Gene Symbol: ZNF281
ZNF281
0.010 AlteredExpression group BEFREE <b>Conclusions:</b> The identification of transcription factor ZNF281 as a novel player of intestinal inflammation and fibrosis allows a deeper comprehension of the pathogenetic mechanisms underlying inflammatory bowel disease (IBD) and provide a new target for their cure. 30619271 2018
Entrez Id: 27034
Gene Symbol: ACAD8
ACAD8
0.100 GeneticVariation group BEFREE <b>Conclusions:</b> The self-monitoring of IBD activity with a combination of a rapid fecal calprotectin home test and a symptom questionnaire provides an option for individualized care for IBD patients. 31264494 2019
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.600 Biomarker group BEFREE <b>Introduction</b>: Tumor necrosis factor-α (TNF-α)-blocking agents are drugs approved for the treatment of inflammatory bowel diseases (IBDs). 31490707 2019
Entrez Id: 8174
Gene Symbol: MADCAM1
MADCAM1
0.070 Biomarker group BEFREE <b>Introduction</b>: The mucosal addressin cell adhesion molecule-1 (MAdCAM-1) plays a key role in the endothelial adhesion and migration of lymphocytes to sites of inflammation in inflammatory bowel disease. 31709847 2020
Entrez Id: 1401
Gene Symbol: CRP
CRP
0.100 Biomarker group BEFREE <b>Introduction:</b> Blood C-reactive protein (CRP) and fecal calprotectin levels are routinely measured as surrogate markers of disease activity in Inflammatory Bowel Disease (IBD), but often do not correlate well with the degree of mucosal inflammation in the intestine as established by endoscopy. 31772929 2019